Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 AC093616.1-201ENST00000427434 2095 ntBASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
PCDHB11Q9Y5F2 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC016251.1-201ENST00000624299 4198 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC108099.1-201ENST00000564402 3258 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 RNU5F-7P-201ENST00000363696 115 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 SNORD46-201ENST00000364043 104 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 RNVU1-15-201ENST00000384476 165 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 MIR301B-201ENST00000390813 78 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 FCF1P10-201ENST00000407590 479 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AP000357.1-201ENST00000409926 1165 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC009237.2-201ENST00000421358 284 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 PYHIN5P-201ENST00000431627 723 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 MTND4LP10-201ENST00000435146 291 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC098828.1-201ENST00000436164 440 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 ARMC4P1-201ENST00000438905 707 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 CALM1P2-201ENST00000452941 448 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AL390026.1-201ENST00000456647 457 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 NUTF2P4-201ENST00000458353 381 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 RPL34P33-201ENST00000486062 334 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC135352.1-201ENST00000506173 1418 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC104108.1-201ENST00000509930 412 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC083906.4-201ENST00000514634 987 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC007923.2-201ENST00000584218 1591 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC007342.8-201ENST00000623278 678 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC124864.2-201ENST00000624736 186 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 NSRP1P1-201ENST00000444067 1693 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AC008985.1-201ENST00000624169 2239 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 AL035555.1-201ENST00000404462 1790 ntBASIC7.82□□□□□ -1.16
PCDHB11Q9Y5F2 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 SSXP3-201ENST00000442971 1300 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL669831.5-218ENST00000591702 1873 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC016582.1-202ENST00000636341 2982 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ABCA17P-204ENST00000494925 3478 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms