Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AL132657.2-201ENST00000564417 358 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AL357140.4-201ENST00000636827 412 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AC007485.2-201ENST00000623493 1667 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 NEK2P4-201ENST00000425793 1329 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AL512310.3-201ENST00000547023 1335 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 MFSD8-217ENST00000641178 4374 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CTDP1Q9Y5B0 AL512283.1-201ENST00000606756 1384 ntBASIC7.46□□□□□ -1.21
CTDP1Q9Y5B0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.46□□□□□ -1.21
CTDP1Q9Y5B0 AC130360.2-201ENST00000533477 1556 ntBASIC7.46□□□□□ -1.21
CTDP1Q9Y5B0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.46□□□□□ -1.21
CTDP1Q9Y5B0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CTDP1Q9Y5B0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 STAG3L4-201ENST00000352103 530 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 RNU6-883P-201ENST00000384597 107 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 UBE2V1P6-201ENST00000430840 422 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 PMS2P9-201ENST00000441237 515 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 GTF2IP14-201ENST00000441415 586 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 OR13C1P-201ENST00000457612 963 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 GOLGA5P1-201ENST00000507317 980 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AC083906.1-201ENST00000509298 406 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 ZNF519P4-201ENST00000514008 125 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AC005363.1-201ENST00000530779 351 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 DYNLL1P1-201ENST00000595442 269 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AC104763.3-201ENST00000613765 618 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 TSHZ2-205ENST00000626626 670 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AC008993.2-201ENST00000631744 806 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 MAPK10-350ENST00000641777 965 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AKAP17BP-201ENST00000431706 2719 ntBASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CTDP1Q9Y5B0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 LINC01616-201ENST00000561816 2280 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 SAGE3P-201ENST00000619800 1635 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AL031651.1-201ENST00000615357 1438 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 SNORD16-201ENST00000362803 99 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 RSL24D1P1-201ENST00000404972 493 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AL139805.1-201ENST00000407837 289 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms