Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AL121977.1-201ENST00000401636 979 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 NPM1P36-201ENST00000415681 835 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 RPS4XP5-201ENST00000419038 768 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AL390879.1-201ENST00000439143 386 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 SETP20-201ENST00000457046 852 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AL157777.1-201ENST00000468100 304 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AL122020.1-201ENST00000472287 459 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 RPL7P51-201ENST00000490532 749 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC008629.2-201ENST00000503783 483 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 SETP21-201ENST00000514799 892 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 RNA5SP438-201ENST00000516561 112 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC006115.2-201ENST00000596823 202 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 AC005224.3-201ENST00000584683 2140 ntBASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPC1L1Q9UHC9 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 MIR1203-201ENST00000408812 85 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 IPPKP1-201ENST00000422501 768 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC084754.1-201ENST00000463466 464 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC104109.1-201ENST00000498563 436 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC068305.2-201ENST00000550567 1205 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 MIR4776-2-201ENST00000580204 80 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC027243.2-201ENST00000602530 724 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC067773.1-201ENST00000603284 1094 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 uc_338.26-201ENST00000612659 160 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AC129778.1-202ENST00000623812 261 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AL591379.1-207ENST00000635982 261 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.09□□□□□ -1.12
NPC1L1Q9UHC9 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 RPS17P15-201ENST00000475609 349 ntBASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 OR5H7P-201ENST00000514084 930 ntBASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 RPL12P48-201ENST00000605620 304 ntBASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 AC145423.1-201ENST00000605712 336 ntBASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPC1L1Q9UHC9 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.07□□□□□ -1.12
NPC1L1Q9UHC9 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms