Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 AL035555.1-201ENST00000404462 1790 ntBASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 MIR133B-201ENST00000362210 119 ntBASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 PRUNEP1-201ENST00000425846 705 ntBASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 KCTD10P1-201ENST00000434203 625 ntBASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 RPL31P44-201ENST00000447680 377 ntBASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 AC011493.1-201ENST00000596753 1632 ntBASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
RIMBP3Q9UFD9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 MIR3189-201ENST00000578735 73 ntBASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 RNU4ATAC-201ENST00000580972 127 ntBASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 AC145423.1-201ENST00000605712 336 ntBASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 AC009831.5-201ENST00000624000 3189 ntBASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 AC008937.3-201ENST00000606813 1700 ntBASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
RIMBP3Q9UFD9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 FAM3C2-201ENST00000312214 681 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 RNU1-43P-201ENST00000365052 165 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 AC009237.10-201ENST00000414112 510 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 AC009237.5-201ENST00000414271 501 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 DNAJC19P7-201ENST00000428811 344 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 TRY2P-201ENST00000448860 689 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 RN7SKP147-201ENST00000517154 244 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 RBM22P1-201ENST00000578589 1214 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 MIR92B-201ENST00000607575 96 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 AL132640.3-201ENST00000630473 177 ntBASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
RIMBP3Q9UFD9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms