Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC026688.1-201ENST00000520639 1168 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 RPA2P3-201ENST00000533268 770 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 OR4A40P-201ENST00000533878 948 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AL731537.2-201ENST00000561565 951 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC018558.5-201ENST00000565840 952 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC006924.1-201ENST00000610750 559 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MIR6503-201ENST00000622884 86 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 CLUHP10-201ENST00000631979 980 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 SNX18P3-202ENST00000565670 1750 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC068769.1-201ENST00000474767 2426 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 ARSFP1-201ENST00000398758 477 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 RPL7P58-201ENST00000402913 758 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL451046.1-201ENST00000406097 534 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AMZ2P2-201ENST00000406819 1057 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 RN7SKP129-201ENST00000410288 299 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 UBTFL2-201ENST00000411859 1191 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 EEF1B2P8-201ENST00000414101 671 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 RPL21P50-201ENST00000417698 477 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 NME1P1-201ENST00000420914 382 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 CR848007.2-201ENST00000424918 787 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC012497.1-201ENST00000429392 575 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 MORF4-201ENST00000447135 971 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC017099.1-201ENST00000448261 1028 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 BUD31P2-201ENST00000449374 300 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 RPS27AP3-201ENST00000453803 454 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL022319.1-201ENST00000458183 1167 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC022730.1-201ENST00000473114 568 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC108157.1-201ENST00000510511 539 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC093664.1-201ENST00000511779 289 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AP001804.1-201ENST00000526868 919 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 WBP1LP11-201ENST00000586141 328 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC026898.1-201ENST00000586404 571 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC005332.4-201ENST00000592752 579 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AL589863.1-201ENST00000595383 631 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 HMGB1P51-201ENST00000605166 638 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC015802.5-201ENST00000607478 399 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 OR51C1P-201ENST00000608504 942 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 WBP1LP8-201ENST00000617401 327 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC009120.7-201ENST00000623452 780 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AC116667.2-201ENST00000641075 823 ntBASIC6.05□□□□□ -1.44
BRF2Q9HAW0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRF2Q9HAW0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms