Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM55Q9BYV6 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 KYNUP1-201ENST00000466683 1406 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 RNU4-7P-201ENST00000364758 141 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 RNU6-244P-201ENST00000391028 104 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC113608.1-201ENST00000398740 305 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AL139100.1-201ENST00000408001 498 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 SNORA3.1-201ENST00000408166 111 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 SNORA2C-201ENST00000408564 137 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 PTP4A1P1-201ENST00000420539 515 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 EEF1GP7-201ENST00000422983 703 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC244505.2-201ENST00000435089 759 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC010240.2-201ENST00000445363 1205 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 VN1R40P-201ENST00000455196 941 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 RPS4XP19-201ENST00000460237 736 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 RN7SL88P-201ENST00000480166 299 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC068522.1-201ENST00000482895 345 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC093325.1-201ENST00000508378 326 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC095059.2-201ENST00000510601 933 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC016559.1-201ENST00000511420 199 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC074087.1-201ENST00000512059 724 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 OR7E154P-201ENST00000525174 932 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 OR7E87P-201ENST00000532397 929 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC244502.2-201ENST00000543361 851 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC015818.6-201ENST00000584274 634 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC103724.4-201ENST00000605981 292 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC107952.2-201ENST00000606048 486 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC093783.1-201ENST00000612976 329 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 UGT2B27P-201ENST00000505092 1620 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 ASNSP6-201ENST00000592770 1618 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 SOCS5P5-201ENST00000402732 1586 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 AC112243.1-201ENST00000623949 3851 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 WBP11P1-201ENST00000562560 1931 ntBASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM55Q9BYV6 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 CLCA3P-203ENST00000490028 2781 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 SNORD116-12-201ENST00000384468 92 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 Y_RNA.578-201ENST00000390903 88 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 TYMSP1-201ENST00000407851 869 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 SNORA11D-201ENST00000408548 128 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 SNORA11E-201ENST00000408778 128 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 RN7SKP137-201ENST00000411074 307 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 RPS3AP37-201ENST00000419176 745 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 RPL17P17-201ENST00000419491 557 ntBASIC7.1□□□□□ -1.27
TRIM55Q9BYV6 SNX18P3-201ENST00000424993 835 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms