Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VRK1Q99986 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 OR56A4-201ENST00000330728 1209 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 RNA5SP114-201ENST00000363780 113 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
VRK1Q99986 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
VRK1Q99986 RNU6-1005P-201ENST00000384519 107 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 RNU6-1055P-201ENST00000391085 107 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 RNA5SP105-201ENST00000391123 113 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 RNA5SP53-201ENST00000391299 120 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
VRK1Q99986 RPL7P58-201ENST00000402913 758 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 RN7SKP268-201ENST00000411107 316 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 OR51B3P-201ENST00000412287 913 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 MTND4LP17-201ENST00000414607 293 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 NANOGP5-201ENST00000424456 877 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 AC027124.1-201ENST00000440852 466 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 AC009244.1-201ENST00000450566 258 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AL354872.1-201ENST00000456361 967 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC131233.1-201ENST00000479200 955 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC093534.1-201ENST00000504977 132 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 BOLA3P3-201ENST00000505182 232 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC147055.3-201ENST00000510547 851 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 MTCYBP19-201ENST00000517463 1124 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 AP001803.1-201ENST00000525668 147 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 MIR4800-201ENST00000537353 80 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AL109628.1-201ENST00000556877 366 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VRK1Q99986 AC093524.1-201ENST00000564266 1094 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.12□□□□□ -1.43
VRK1Q99986 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VRK1Q99986 AC015801.1-201ENST00000585651 153 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 RNU6-84P-201ENST00000607737 102 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 AC012629.3-201ENST00000623397 328 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC106782.7-201ENST00000624024 418 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC133555.5-201ENST00000624430 418 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 AC092451.3-201ENST00000625067 1343 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.12□□□□□ -1.43
VRK1Q99986 AC135068.11-201ENST00000636378 921 ntBASIC6.12□□□□□ -1.43
VRK1Q99986 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VRK1Q99986 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VRK1Q99986 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VRK1Q99986 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
VRK1Q99986 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
VRK1Q99986 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK1Q99986 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK1Q99986 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
VRK1Q99986 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK1Q99986 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.11□□□□□ -1.43
VRK1Q99986 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VRK1Q99986 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
VRK1Q99986 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 RN7SKP55-201ENST00000364888 307 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VRK1Q99986 PDCL3P5-201ENST00000398028 722 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 CHMP1B2P-201ENST00000399581 597 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 RNA5SP280-201ENST00000411230 115 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 UBE2V1P11-201ENST00000411559 285 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK1Q99986 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK1Q99986 HIGD1AP15-201ENST00000416198 280 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.11□□□□□ -1.43
VRK1Q99986 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
VRK1Q99986 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK1Q99986 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VRK1Q99986 PUDPP2-201ENST00000431423 643 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 Z84478.1-201ENST00000438230 1219 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 AC245047.2-201ENST00000441060 530 ntBASIC6.11□□□□□ -1.43
VRK1Q99986 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.11□□□□□ -1.43
VRK1Q99986 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms