Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.34□□□□□ -1.07
HLA-CQ95604 AC093698.1-201ENST00000423843 571 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 SAR1AP4-201ENST00000429225 591 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AC002069.1-201ENST00000429649 1159 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 Z97634.1-203ENST00000435229 471 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AL831737.1-201ENST00000441288 271 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.34□□□□□ -1.07
HLA-CQ95604 SETP14-201ENST00000497538 873 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 DYNLL1P6-201ENST00000503440 264 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.34□□□□□ -1.07
HLA-CQ95604 AC130366.1-201ENST00000526505 1192 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AP003080.1-202ENST00000526526 915 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 OR4N1P-201ENST00000554847 949 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.34□□□□□ -1.07
HLA-CQ95604 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.34□□□□□ -1.07
HLA-CQ95604 AL157394.1-201ENST00000562983 1224 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HLA-CQ95604 MIR3913-1-201ENST00000577744 102 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.34□□□□□ -1.07
HLA-CQ95604 AL360085.1-201ENST00000604713 532 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 BNIP3P4-201ENST00000604946 565 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AC107214.2-201ENST00000608204 634 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AC006065.6-201ENST00000625201 545 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 AC006453.3-201ENST00000635891 377 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC8.34□□□□□ -1.07
HLA-CQ95604 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
HLA-CQ95604 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.34□□□□□ -1.07
HLA-CQ95604 AC011447.7-201ENST00000624228 1590 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
HLA-CQ95604 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
HLA-CQ95604 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.34□□□□□ -1.07
HLA-CQ95604 AC092725.2-201ENST00000567658 1389 ntBASIC8.34□□□□□ -1.07
HLA-CQ95604 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-CQ95604 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.08
HLA-CQ95604 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-CQ95604 C3P1-202ENST00000497718 4954 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-CQ95604 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
HLA-CQ95604 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 RNU6-543P-201ENST00000362576 108 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 SNORA10-201ENST00000384084 133 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 Y_RNA.598-201ENST00000410480 95 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 PPIAP30-201ENST00000415473 519 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AL009174.1-201ENST00000426577 416 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-CQ95604 DDX11L10-201ENST00000430178 571 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 IGLV3-4-201ENST00000432300 244 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 TRAPPC2P8-201ENST00000440676 396 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 PPIAP32-201ENST00000449940 472 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AL122013.1-201ENST00000473054 801 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 RPS4XP17-201ENST00000479057 754 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-CQ95604 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-CQ95604 RN7SKP31-201ENST00000516354 278 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC8.33□□□□□ -1.08
HLA-CQ95604 MTND1P35-201ENST00000526739 508 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 OR6M3P-201ENST00000531567 700 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 FDPSP3-201ENST00000556903 1013 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 GTF2IP8-201ENST00000560687 584 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AC007151.1-201ENST00000572774 483 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 MIR3137-201ENST00000577367 75 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AC073091.2-201ENST00000603205 907 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-CQ95604 SAMMSON-227ENST00000642114 1199 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-CQ95604 AC136428.3-201ENST00000566387 1990 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-CQ95604 AC130464.1-201ENST00000416201 1500 ntBASIC8.33□□□□□ -1.08
HLA-CQ95604 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-CQ95604 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms