Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 AC239367.3-201ENST00000428996 814 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AL590128.1-201ENST00000433407 286 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 AC093166.3-201ENST00000448785 303 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 RSL24D1P3-201ENST00000449255 495 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 BZW1P1-201ENST00000454901 1240 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 UOX-201ENST00000471089 899 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.2□□□□□ -1.26
DDX1Q92499 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC7.2□□□□□ -1.26
DDX1Q92499 AC121161.1-201ENST00000510606 652 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 SNX18P23-201ENST00000510867 677 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC7.2□□□□□ -1.26
DDX1Q92499 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.2□□□□□ -1.26
DDX1Q92499 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
DDX1Q92499 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.2□□□□□ -1.26
DDX1Q92499 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 MIR3154-201ENST00000577829 84 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 RN7SL199P-201ENST00000578752 281 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 RN7SL656P-201ENST00000579044 281 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 RN7SL404P-201ENST00000582421 281 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 RPL7AP69-201ENST00000595306 806 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AC023762.1-201ENST00000603280 584 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AC026741.1-201ENST00000605892 482 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AL121652.1-201ENST00000608851 448 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AL592494.3-201ENST00000609485 464 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AP005229.2-201ENST00000609980 697 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 RMST_5.1-201ENST00000618704 126 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AC090617.9-201ENST00000623751 147 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AL078595.3-201ENST00000623815 1166 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
DDX1Q92499 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.2□□□□□ -1.26
DDX1Q92499 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
DDX1Q92499 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
DDX1Q92499 FO082842.1-201ENST00000423552 1370 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 DDX43P2-201ENST00000604753 1354 ntBASIC7.2□□□□□ -1.26
DDX1Q92499 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
DDX1Q92499 AL356317.1-201ENST00000396110 1436 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 AC112243.1-201ENST00000623949 3851 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.19□□□□□ -1.26
DDX1Q92499 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 AC110716.2-201ENST00000563865 3945 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
DDX1Q92499 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
DDX1Q92499 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
DDX1Q92499 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 OR2M1P-201ENST00000318104 951 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
DDX1Q92499 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX1Q92499 RNU1-65P-201ENST00000363919 148 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
DDX1Q92499 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.19□□□□□ -1.26
DDX1Q92499 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
DDX1Q92499 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 CYCSP17-201ENST00000407870 315 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 AC096537.2-201ENST00000413707 714 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC7.19□□□□□ -1.26
DDX1Q92499 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX1Q92499 AC006509.1-201ENST00000420788 634 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 PTPN2P1-201ENST00000423212 1072 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 BX119904.4-201ENST00000424402 301 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX1Q92499 MTCO2P23-201ENST00000425216 680 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.19□□□□□ -1.26
DDX1Q92499 KCTD9P1-201ENST00000430462 1167 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX1Q92499 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.19□□□□□ -1.26
DDX1Q92499 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.19□□□□□ -1.26
DDX1Q92499 AC245452.2-201ENST00000435222 392 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.19□□□□□ -1.26
DDX1Q92499 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX1Q92499 RPSAP40-201ENST00000442343 891 ntBASIC7.19□□□□□ -1.26
DDX1Q92499 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms