Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 SAGE3P-201ENST00000619800 1635 ntBASIC6.89□□□□□ -1.31
HERC6Q8IVU3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.89□□□□□ -1.31
HERC6Q8IVU3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AL137058.3-201ENST00000624531 3099 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 CASC19-255ENST00000641733 1385 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 OR52B3P-201ENST00000314715 928 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 HMGN1P36-201ENST00000446623 298 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 OR6C72P-201ENST00000451403 892 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AC023141.9-201ENST00000458734 412 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 RPL34P33-201ENST00000486062 334 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AC022415.1-202ENST00000486612 523 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AC022206.1-201ENST00000495947 347 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 MTND6P8-201ENST00000503471 522 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 RPA2P1-201ENST00000556557 721 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 VN1R81P-201ENST00000602085 372 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 BUB1P1-201ENST00000603541 607 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 RFPL4AP6-201ENST00000616792 846 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AL354718.1-201ENST00000619764 589 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AL049767.1-202ENST00000637826 242 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 AL596244.1-201ENST00000567068 3779 ntBASIC6.88□□□□□ -1.31
HERC6Q8IVU3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HERC6Q8IVU3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AL669831.5-218ENST00000591702 1873 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 RN7SKP292-201ENST00000365522 317 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 U3.25-201ENST00000391209 220 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 RN7SKP278-201ENST00000410504 342 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 RPL23AP64-201ENST00000469465 435 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 RN7SL714P-201ENST00000487050 298 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AC008638.1-201ENST00000506035 866 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AC114781.3-201ENST00000512083 142 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 RNA5SP438-201ENST00000516561 112 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 AP001823.1-201ENST00000604056 1003 ntBASIC6.87□□□□□ -1.31
HERC6Q8IVU3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.87□□□□□ -1.31
HERC6Q8IVU3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms