Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 Z93929.1-201ENST00000418200 1475 ntBASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 RPL5P12-201ENST00000477071 851 ntBASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 MIR4776-2-201ENST00000580204 80 ntBASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AL021918.2-201ENST00000613415 194 ntBASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AC096861.1-201ENST00000616652 240 ntBASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 AL359195.2-201ENST00000623657 4412 ntBASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SHROOM1Q2M3G4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AC022819.1-201ENST00000563495 3910 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 BX284613.1-201ENST00000452221 1641 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 RNU11-6P-201ENST00000391127 133 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AL355355.1-201ENST00000442900 793 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 MGAT2P1-201ENST00000449718 797 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 NXT1P1-201ENST00000458481 316 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 RPA2P3-201ENST00000533268 770 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 RN7SL787P-201ENST00000613000 284 ntBASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SHROOM1Q2M3G4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 MAPK10-261ENST00000641050 3109 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AL137058.3-201ENST00000624531 3099 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 CASC19-243ENST00000641588 1546 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 RPS7P8-201ENST00000418311 581 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 RPS15AP30-201ENST00000420976 390 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 GEMIN2P1-201ENST00000454246 752 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AC006530.1-201ENST00000555980 571 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AC007448.1-201ENST00000582714 234 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AC109309.2-201ENST00000612597 332 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 RNA5SP440-201ENST00000612665 119 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms