Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 MIR191-201ENST00000384873 92 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 PRELID1P1-201ENST00000403549 660 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 AL139805.1-201ENST00000407837 289 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 RPS21P8-201ENST00000413365 247 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 NMD3P2-201ENST00000421815 761 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.18□□□□□ -1.42
SIX1Q15475 AC097359.1-201ENST00000447946 463 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 AL603882.1-201ENST00000463059 681 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 AC128716.1-201ENST00000475129 166 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 AC044810.1-201ENST00000480271 711 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.18□□□□□ -1.42
SIX1Q15475 HMGN1P16-201ENST00000508308 283 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.18□□□□□ -1.42
SIX1Q15475 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.18□□□□□ -1.42
SIX1Q15475 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 BTG1P1-201ENST00000540396 508 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX1Q15475 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.18□□□□□ -1.42
SIX1Q15475 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.18□□□□□ -1.42
SIX1Q15475 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX1Q15475 AC012368.3-201ENST00000604190 219 ntBASIC6.18□□□□□ -1.42
SIX1Q15475 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.18□□□□□ -1.42
SIX1Q15475 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX1Q15475 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.18□□□□□ -1.42
SIX1Q15475 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX1Q15475 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SIX1Q15475 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX1Q15475 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 SNORA21-201ENST00000362423 132 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SIX1Q15475 AL133260.1-201ENST00000405720 405 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 RN7SKP144-201ENST00000411108 279 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 RN7SKP279-201ENST00000411383 298 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 RPL35AP31-201ENST00000418340 337 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 SUMO2P10-201ENST00000452006 288 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 YRDCP3-201ENST00000456507 480 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 RBMY2HP-201ENST00000457961 720 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 AC104164.1-201ENST00000460282 590 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 RN7SL393P-201ENST00000463588 296 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 RPL5P12-201ENST00000477071 851 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 CR383658.1-201ENST00000514609 734 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.17□□□□□ -1.42
SIX1Q15475 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 AC007346.2-201ENST00000564816 892 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX1Q15475 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 AC027279.4-201ENST00000624371 2072 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX1Q15475 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 AC009962.1-201ENST00000567327 3813 ntBASIC6.17□□□□□ -1.42
SIX1Q15475 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIX1Q15475 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX1Q15475 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIX1Q15475 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.16□□□□□ -1.42
SIX1Q15475 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SIX1Q15475 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIX1Q15475 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SIX1Q15475 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIX1Q15475 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.16□□□□□ -1.42
SIX1Q15475 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.16□□□□□ -1.42
SIX1Q15475 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIX1Q15475 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.16□□□□□ -1.42
SIX1Q15475 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SIX1Q15475 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms