Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC092865.3-201ENST00000425390 1026 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 MYO5BP3-201ENST00000431872 1279 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC083855.1-201ENST00000440041 258 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 MTND1P26-201ENST00000440488 538 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 EXOSC3P1-201ENST00000448649 500 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AL390728.3-201ENST00000452704 270 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC099670.1-201ENST00000455141 783 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AP005202.1-201ENST00000489915 867 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AC010374.1-201ENST00000503762 1237 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 PPBPP2-201ENST00000513150 1362 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 Y_RNA.717-201ENST00000517106 92 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.12□□□□□ -1.43
NKX6-1P78426 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AGGF1P5-201ENST00000567900 919 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 MIR4428-201ENST00000584884 73 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 SNX6P1-201ENST00000601728 1224 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC011500.1-201ENST00000601963 469 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AL359513.1-201ENST00000614364 557 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX6-1P78426 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AP000866.6-201ENST00000638898 3579 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NKX6-1P78426 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AC010401.2-201ENST00000575137 4934 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NKX6-1P78426 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NKX6-1P78426 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX6-1P78426 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX6-1P78426 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
NKX6-1P78426 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 AC011503.2-201ENST00000594230 1500 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX6-1P78426 AL359263.1-201ENST00000441188 2796 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 MFSD8-213ENST00000641134 1327 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 AL121977.1-201ENST00000401636 979 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 RPA2P2-201ENST00000419698 796 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 EIF4A1P1-201ENST00000420241 934 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 BX119917.1-201ENST00000432517 502 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 ELOCP11-201ENST00000436690 332 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 SOCS5P1-201ENST00000440415 949 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.11□□□□□ -1.43
NKX6-1P78426 ELOCP16-201ENST00000444494 332 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 AL031313.1-201ENST00000448435 256 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AL354714.5-201ENST00000450131 590 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 MTND2P8-201ENST00000450555 1025 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 RN7SL160P-201ENST00000468558 284 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC098583.1-201ENST00000480875 255 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC005017.1-201ENST00000482002 490 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.11□□□□□ -1.43
NKX6-1P78426 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 RN7SKP265-201ENST00000516448 223 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 RN7SKP233-201ENST00000517005 110 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC116917.1-201ENST00000520558 305 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX6-1P78426 OR8K4P-201ENST00000534608 872 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AP003717.3-201ENST00000544832 1180 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 DUX4L52-201ENST00000549363 777 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC087888.1-201ENST00000550884 1254 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms