Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
RHBDL3P58872 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.45□□□□□ -1.22
RHBDL3P58872 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RHBDL3P58872 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AL096711.1-201ENST00000404780 554 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 MTND3P20-201ENST00000407663 186 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 IPPKP1-201ENST00000422501 768 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 FAM204CP-201ENST00000424489 642 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 SNRPFP2-201ENST00000440710 251 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC006499.4-201ENST00000510947 694 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 AC090958.1-201ENST00000511122 351 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.45□□□□□ -1.22
RHBDL3P58872 PRMT5P1-201ENST00000514351 598 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 RN7SKP238-201ENST00000516483 249 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 Y_RNA.710-201ENST00000516975 110 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 AC060775.1-201ENST00000518241 520 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.45□□□□□ -1.22
RHBDL3P58872 MIR5095-201ENST00000578844 88 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC092681.3-201ENST00000609463 678 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 AP002345.2-201ENST00000609961 904 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC129915.3-201ENST00000634128 948 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RHBDL3P58872 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.45□□□□□ -1.22
RHBDL3P58872 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC013488.1-201ENST00000526618 1838 ntBASIC7.45□□□□□ -1.22
RHBDL3P58872 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.45□□□□□ -1.22
RHBDL3P58872 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.44□□□□□ -1.22
RHBDL3P58872 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.44□□□□□ -1.22
RHBDL3P58872 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 AC105235.1-201ENST00000623208 1816 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 RNA5SP273-201ENST00000362484 113 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 RNA5SP477-201ENST00000362639 119 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 MTCO1P51-201ENST00000427672 1060 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.44□□□□□ -1.22
RHBDL3P58872 HLA-DPA3-207ENST00000454398 229 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 BZW1P1-201ENST00000454901 1240 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.44□□□□□ -1.22
RHBDL3P58872 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.44□□□□□ -1.22
RHBDL3P58872 AC073916.1-201ENST00000545095 130 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.44□□□□□ -1.22
RHBDL3P58872 AC009120.3-201ENST00000563335 499 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.44□□□□□ -1.22
RHBDL3P58872 AC084036.1-201ENST00000609190 508 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 MIR6862-1-201ENST00000613016 70 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 MIR6862-2-201ENST00000614755 70 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.44□□□□□ -1.22
RHBDL3P58872 AC073488.3-201ENST00000631611 778 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.44□□□□□ -1.22
RHBDL3P58872 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.44□□□□□ -1.22
RHBDL3P58872 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 AC011416.1-201ENST00000514947 1732 ntBASIC7.44□□□□□ -1.22
RHBDL3P58872 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RHBDL3P58872 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RHBDL3P58872 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 AL359195.2-201ENST00000623657 4412 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 PSG10P-201ENST00000501199 1500 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms