Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
VCPP55072 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 AC006511.3-201ENST00000624929 1783 ntBASIC6.75□□□□□ -1.33
VCPP55072 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.75□□□□□ -1.33
VCPP55072 RNA5SP443-201ENST00000363083 132 ntBASIC6.75□□□□□ -1.33
VCPP55072 SNORA51.9-201ENST00000384295 124 ntBASIC6.75□□□□□ -1.33
VCPP55072 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.75□□□□□ -1.33
VCPP55072 AL359092.1-201ENST00000417156 265 ntBASIC6.75□□□□□ -1.33
VCPP55072 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.75□□□□□ -1.33
VCPP55072 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.75□□□□□ -1.33
VCPP55072 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.75□□□□□ -1.33
VCPP55072 RBMY2AP-201ENST00000445405 1157 ntBASIC6.75□□□□□ -1.33
VCPP55072 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.75□□□□□ -1.33
VCPP55072 RBMY2CP-201ENST00000448575 1157 ntBASIC6.75□□□□□ -1.33
VCPP55072 RBMY2DP-202ENST00000448881 1157 ntBASIC6.75□□□□□ -1.33
VCPP55072 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.75□□□□□ -1.33
VCPP55072 RBMY2BP-202ENST00000451071 1156 ntBASIC6.75□□□□□ -1.33
VCPP55072 AC026348.1-201ENST00000462549 1053 ntBASIC6.75□□□□□ -1.33
VCPP55072 RN7SL717P-201ENST00000478343 297 ntBASIC6.75□□□□□ -1.33
VCPP55072 AC017007.3-201ENST00000479865 435 ntBASIC6.75□□□□□ -1.33
VCPP55072 OR7E99P-201ENST00000505750 922 ntBASIC6.75□□□□□ -1.33
VCPP55072 IGHV1-14-201ENST00000523391 241 ntBASIC6.75□□□□□ -1.33
VCPP55072 AL133399.1-201ENST00000527476 298 ntBASIC6.75□□□□□ -1.33
VCPP55072 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.75□□□□□ -1.33
VCPP55072 RN7SL208P-201ENST00000577964 296 ntBASIC6.75□□□□□ -1.33
VCPP55072 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.75□□□□□ -1.33
VCPP55072 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.75□□□□□ -1.33
VCPP55072 AL589935.2-201ENST00000616471 1231 ntBASIC6.75□□□□□ -1.33
VCPP55072 MRPL57P1-201ENST00000621486 265 ntBASIC6.75□□□□□ -1.33
VCPP55072 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.75□□□□□ -1.33
VCPP55072 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
VCPP55072 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.75□□□□□ -1.33
VCPP55072 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.75□□□□□ -1.33
VCPP55072 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 SHQ1P1-201ENST00000437111 1544 ntBASIC6.75□□□□□ -1.33
VCPP55072 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 AL157831.2-201ENST00000564681 3095 ntBASIC6.75□□□□□ -1.33
VCPP55072 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.75□□□□□ -1.33
VCPP55072 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VCPP55072 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
VCPP55072 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.74□□□□□ -1.33
VCPP55072 RNF19BPY-201ENST00000458209 1550 ntBASIC6.74□□□□□ -1.33
VCPP55072 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 AC105235.1-201ENST00000623208 1816 ntBASIC6.74□□□□□ -1.33
VCPP55072 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 AL354854.1-201ENST00000455940 1363 ntBASIC6.74□□□□□ -1.33
VCPP55072 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 AC119674.1-213ENST00000641177 1386 ntBASIC6.74□□□□□ -1.33
VCPP55072 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VCPP55072 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VCPP55072 RNA5SP350-201ENST00000363298 111 ntBASIC6.74□□□□□ -1.33
VCPP55072 SUGT1P2-201ENST00000379452 992 ntBASIC6.74□□□□□ -1.33
VCPP55072 AL139805.1-201ENST00000407837 289 ntBASIC6.74□□□□□ -1.33
VCPP55072 AC007568.1-201ENST00000422912 471 ntBASIC6.74□□□□□ -1.33
VCPP55072 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.74□□□□□ -1.33
VCPP55072 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.74□□□□□ -1.33
VCPP55072 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.74□□□□□ -1.33
VCPP55072 AC023194.2-201ENST00000465398 406 ntBASIC6.74□□□□□ -1.33
VCPP55072 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.74□□□□□ -1.33
VCPP55072 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 RNA5SP418-201ENST00000515951 117 ntBASIC6.74□□□□□ -1.33
VCPP55072 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.74□□□□□ -1.33
VCPP55072 OR5D2P-201ENST00000524390 911 ntBASIC6.74□□□□□ -1.33
VCPP55072 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.74□□□□□ -1.33
VCPP55072 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.74□□□□□ -1.33
VCPP55072 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.74□□□□□ -1.33
VCPP55072 MRPS21P8-201ENST00000569196 235 ntBASIC6.74□□□□□ -1.33
VCPP55072 MIR3176-201ENST00000582210 90 ntBASIC6.74□□□□□ -1.33
VCPP55072 AC009237.12-201ENST00000604755 742 ntBASIC6.74□□□□□ -1.33
VCPP55072 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.74□□□□□ -1.33
VCPP55072 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.74□□□□□ -1.33
VCPP55072 AC016769.4-201ENST00000616893 535 ntBASIC6.74□□□□□ -1.33
VCPP55072 MIR6811-201ENST00000620409 58 ntBASIC6.74□□□□□ -1.33
VCPP55072 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.74□□□□□ -1.33
VCPP55072 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 AL161901.1-201ENST00000624954 3425 ntBASIC6.74□□□□□ -1.33
VCPP55072 CCAT2-201ENST00000630920 1752 ntBASIC6.74□□□□□ -1.33
VCPP55072 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.74□□□□□ -1.33
VCPP55072 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.74□□□□□ -1.33
VCPP55072 AC073429.2-201ENST00000569694 1444 ntBASIC6.74□□□□□ -1.33
VCPP55072 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
VCPP55072 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
VCPP55072 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VCPP55072 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VCPP55072 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms