Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.78□□□□□ -1.32
COPB1P53618 AC092474.3-201ENST00000603022 568 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.78□□□□□ -1.32
COPB1P53618 AC138473.1-201ENST00000605717 526 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AP005131.7-201ENST00000610087 611 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AC010998.3-201ENST00000613871 631 ntBASIC6.78□□□□□ -1.32
COPB1P53618 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.78□□□□□ -1.32
COPB1P53618 AC007603.3-201ENST00000636915 979 ntBASIC6.78□□□□□ -1.32
COPB1P53618 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPB1P53618 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.78□□□□□ -1.32
COPB1P53618 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.78□□□□□ -1.32
COPB1P53618 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COPB1P53618 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COPB1P53618 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COPB1P53618 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
COPB1P53618 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.32
COPB1P53618 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 AL133243.2-201ENST00000610331 1621 ntBASIC6.77□□□□□ -1.33
COPB1P53618 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COPB1P53618 RPL21P50-201ENST00000417698 477 ntBASIC6.77□□□□□ -1.33
COPB1P53618 IGLV3-4-201ENST00000432300 244 ntBASIC6.77□□□□□ -1.33
COPB1P53618 NPM1P9-201ENST00000453156 844 ntBASIC6.77□□□□□ -1.33
COPB1P53618 RN7SL326P-201ENST00000477493 296 ntBASIC6.77□□□□□ -1.33
COPB1P53618 AC139713.1-202ENST00000512366 460 ntBASIC6.77□□□□□ -1.33
COPB1P53618 SETP12-201ENST00000514068 805 ntBASIC6.77□□□□□ -1.33
COPB1P53618 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.77□□□□□ -1.33
COPB1P53618 MTND1P36-201ENST00000522384 936 ntBASIC6.77□□□□□ -1.33
COPB1P53618 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COPB1P53618 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.77□□□□□ -1.33
COPB1P53618 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.77□□□□□ -1.33
COPB1P53618 AC138207.8-204ENST00000579588 527 ntBASIC6.77□□□□□ -1.33
COPB1P53618 AC009303.3-201ENST00000591103 736 ntBASIC6.77□□□□□ -1.33
COPB1P53618 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 AL352984.2-202ENST00000613699 155 ntBASIC6.77□□□□□ -1.33
COPB1P53618 AL138960.1-201ENST00000613838 513 ntBASIC6.77□□□□□ -1.33
COPB1P53618 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COPB1P53618 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COPB1P53618 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPB1P53618 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COPB1P53618 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 AL161901.1-201ENST00000624954 3425 ntBASIC6.76□□□□□ -1.33
COPB1P53618 AC079248.1-201ENST00000427568 1546 ntBASIC6.76□□□□□ -1.33
COPB1P53618 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 RNU1-49P-201ENST00000363468 159 ntBASIC6.76□□□□□ -1.33
COPB1P53618 RNA5SP85-201ENST00000365378 119 ntBASIC6.76□□□□□ -1.33
COPB1P53618 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 MIR621-201ENST00000384919 96 ntBASIC6.76□□□□□ -1.33
COPB1P53618 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COPB1P53618 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.76□□□□□ -1.33
COPB1P53618 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.76□□□□□ -1.33
COPB1P53618 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.76□□□□□ -1.33
COPB1P53618 AL645939.3-201ENST00000435408 225 ntBASIC6.76□□□□□ -1.33
COPB1P53618 COX4I1P2-201ENST00000447446 547 ntBASIC6.76□□□□□ -1.33
COPB1P53618 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 RPL12P31-201ENST00000478433 450 ntBASIC6.76□□□□□ -1.33
COPB1P53618 GM2AP2-201ENST00000491764 562 ntBASIC6.76□□□□□ -1.33
COPB1P53618 AL133372.1-201ENST00000493565 745 ntBASIC6.76□□□□□ -1.33
COPB1P53618 SNX18P24-201ENST00000505249 671 ntBASIC6.76□□□□□ -1.33
COPB1P53618 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.76□□□□□ -1.33
COPB1P53618 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.76□□□□□ -1.33
COPB1P53618 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 CLUHP10-201ENST00000631979 980 ntBASIC6.76□□□□□ -1.33
COPB1P53618 AL163152.1-201ENST00000642001 374 ntBASIC6.76□□□□□ -1.33
COPB1P53618 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COPB1P53618 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.76□□□□□ -1.33
COPB1P53618 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COPB1P53618 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPB1P53618 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.75□□□□□ -1.33
COPB1P53618 ZNF402P-201ENST00000404435 3100 ntBASIC6.75□□□□□ -1.33
COPB1P53618 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.75□□□□□ -1.33
COPB1P53618 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms