Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC10.47□□□□□ -0.73
SMARCA4P51532 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMARCA4P51532 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SMARCA4P51532 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC10.47□□□□□ -0.73
SMARCA4P51532 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMARCA4P51532 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMARCA4P51532 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMARCA4P51532 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC10.47□□□□□ -0.73
SMARCA4P51532 RNU1-24P-201ENST00000364285 165 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 MIR640-201ENST00000385086 96 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 AL589647.1-201ENST00000402485 466 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 MYL6P5-201ENST00000412707 459 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 RBMY2KP-201ENST00000418221 992 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC10.47□□□□□ -0.73
SMARCA4P51532 AC108161.1-201ENST00000461060 402 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC10.47□□□□□ -0.73
SMARCA4P51532 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC10.47□□□□□ -0.73
SMARCA4P51532 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC10.47□□□□□ -0.73
SMARCA4P51532 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC10.47□□□□□ -0.73
SMARCA4P51532 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC10.47□□□□□ -0.73
SMARCA4P51532 AL049539.1-201ENST00000611964 459 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 AP001784.1-201ENST00000624107 428 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 AL136531.3-201ENST00000624378 3658 ntBASIC10.47□□□□□ -0.73
SMARCA4P51532 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC10.47□□□□□ -0.73
SMARCA4P51532 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SMARCA4P51532 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
SMARCA4P51532 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
SMARCA4P51532 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SMARCA4P51532 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SMARCA4P51532 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SMARCA4P51532 MIR223-201ENST00000385204 110 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 AC015977.1-201ENST00000418887 292 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC10.46□□□□□ -0.74
SMARCA4P51532 PGAM1P13-201ENST00000507497 754 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 AP000676.2-201ENST00000529711 301 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC10.46□□□□□ -0.74
SMARCA4P51532 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC10.46□□□□□ -0.74
SMARCA4P51532 AC012616.1-201ENST00000600294 197 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 AC063977.5-201ENST00000601044 974 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 AC013731.1-201ENST00000604340 883 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 AL355974.3-201ENST00000617383 467 ntBASIC10.46□□□□□ -0.74
SMARCA4P51532 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMARCA4P51532 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMARCA4P51532 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC10.45□□□□□ -0.74
SMARCA4P51532 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA4P51532 AL161912.4-201ENST00000623889 2468 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC10.45□□□□□ -0.74
SMARCA4P51532 AC108075.1-201ENST00000424692 529 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC10.45□□□□□ -0.74
SMARCA4P51532 AC087672.1-201ENST00000479876 766 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 AC004453.1-201ENST00000487895 408 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SMARCA4P51532 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC10.45□□□□□ -0.74
SMARCA4P51532 AC007494.1-201ENST00000562293 760 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 AC126915.2-201ENST00000610957 190 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC10.45□□□□□ -0.74
SMARCA4P51532 MIR6810-201ENST00000622701 70 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SMARCA4P51532 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SMARCA4P51532 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA4P51532 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA4P51532 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC10.45□□□□□ -0.74
SMARCA4P51532 AOX3P-204ENST00000491025 2107 ntBASIC10.45□□□□□ -0.74
SMARCA4P51532 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC10.45□□□□□ -0.74
SMARCA4P51532 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 GAPDHP42-201ENST00000406848 981 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 RNU6ATAC18P-201ENST00000408413 101 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 BZW1P1-201ENST00000454901 1240 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 AC079841.1-201ENST00000481228 950 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA4P51532 MIR4436B2-201ENST00000581415 91 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 MIR4436B1-201ENST00000583272 91 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 AC073342.3-201ENST00000624211 193 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 EEF1A1P30-201ENST00000429708 1315 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SMARCA4P51532 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 AC137056.2-201ENST00000624055 1958 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SMARCA4P51532 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SMARCA4P51532 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA4P51532 FAM32BP-201ENST00000344033 333 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 OR13K1P-201ENST00000444577 975 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 MIR4260-201ENST00000583107 67 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA4P51532 TCL6_3.1-201ENST00000619064 137 ntBASIC10.44□□□□□ -0.74
SMARCA4P51532 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA4P51532 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA4P51532 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA4P51532 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC10.43□□□□□ -0.74
SMARCA4P51532 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
SMARCA4P51532 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SMARCA4P51532 MIR130A-201ENST00000385274 89 ntBASIC10.43□□□□□ -0.74
SMARCA4P51532 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms