Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF144AP50876 MAPK10-319ENST00000641459 2542 ntBASIC7.55□□□□□ -1.2
RNF144AP50876 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF144AP50876 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF144AP50876 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF144AP50876 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 MAPK10-281ENST00000641170 3070 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF144AP50876 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 CCT4P2-201ENST00000233836 1548 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 AHCYP5-201ENST00000331585 1238 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 RPL11P4-201ENST00000332269 436 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 MIR135B-201ENST00000362189 97 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF144AP50876 RANP6-201ENST00000413691 644 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 MTND3P17-201ENST00000416968 344 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 MTCO2P12-201ENST00000427426 682 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AL050321.1-201ENST00000432363 400 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 RPL22P17-201ENST00000438729 315 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 AL034397.1-201ENST00000456392 908 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AC092757.1-201ENST00000467293 467 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 H3F3AP5-201ENST00000475267 429 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 ACTG1P13-201ENST00000486987 1043 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 RPL17P37-201ENST00000490729 548 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 AC024451.1-201ENST00000508013 779 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 UGT2A3P7-201ENST00000510485 734 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 OR4A12P-201ENST00000530847 918 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.54□□□□□ -1.2
RNF144AP50876 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 AL157687.1-201ENST00000554853 619 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AC104046.1-201ENST00000559487 406 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 AC092133.1-201ENST00000565828 719 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AC005262.1-201ENST00000588562 362 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 MTCO2P22-201ENST00000603246 681 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 AL161729.4-201ENST00000604650 476 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 COX6CP4-201ENST00000605798 228 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 MIR3662-201ENST00000637030 95 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 AC117529.2-201ENST00000512159 2068 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF144AP50876 NF1P2-201ENST00000556855 2505 ntBASIC7.54□□□□□ -1.2
RNF144AP50876 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RNF144AP50876 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF144AP50876 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
RNF144AP50876 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF144AP50876 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC093225.1-201ENST00000506867 1408 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 RARSP1-201ENST00000542842 1418 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms