Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
RFC3P40938 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC3P40938 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.72□□□□□ -1.49
RFC3P40938 MIR130B-202ENST00000385018 82 ntBASIC5.72□□□□□ -1.49
RFC3P40938 RNU11-201ENST00000387069 134 ntBASIC5.72□□□□□ -1.49
RFC3P40938 RN7SKP121-201ENST00000410842 305 ntBASIC5.72□□□□□ -1.49
RFC3P40938 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 AC023141.3-201ENST00000436698 278 ntBASIC5.72□□□□□ -1.49
RFC3P40938 HIGD1AP16-201ENST00000450986 258 ntBASIC5.72□□□□□ -1.49
RFC3P40938 PPIAP7-201ENST00000454070 489 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC3P40938 RBBP4P1-201ENST00000502424 1276 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AL158068.1-201ENST00000506116 616 ntBASIC5.72□□□□□ -1.49
RFC3P40938 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 AC106800.3-201ENST00000511389 308 ntBASIC5.72□□□□□ -1.49
RFC3P40938 IGKV1D-22-201ENST00000518953 324 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC3P40938 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.72□□□□□ -1.49
RFC3P40938 AP000620.1-201ENST00000527147 504 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AC027369.2-201ENST00000528030 440 ntBASIC5.72□□□□□ -1.49
RFC3P40938 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC3P40938 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC3P40938 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC3P40938 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.72□□□□□ -1.49
RFC3P40938 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.72□□□□□ -1.49
RFC3P40938 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.72□□□□□ -1.49
RFC3P40938 AL360012.1-201ENST00000602813 131 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AP001437.1-201ENST00000608783 456 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AL365181.4-201ENST00000609800 547 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AL445647.2-201ENST00000615170 130 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AC004801.6-201ENST00000616571 978 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AL157762.1-201ENST00000619612 415 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 QRSL1P1-201ENST00000400977 1540 ntBASIC5.72□□□□□ -1.49
RFC3P40938 WDR95P-201ENST00000425638 1542 ntBASIC5.72□□□□□ -1.49
RFC3P40938 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RFC3P40938 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
RFC3P40938 BRAFP1-201ENST00000445336 2703 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AC232271.1-201ENST00000602455 2715 ntBASIC5.72□□□□□ -1.49
RFC3P40938 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RFC3P40938 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RFC3P40938 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RFC3P40938 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.71□□□□□ -1.49
RFC3P40938 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RFC3P40938 MSL3P1-202ENST00000440028 1468 ntBASIC5.71□□□□□ -1.49
RFC3P40938 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.71□□□□□ -1.49
RFC3P40938 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RFC3P40938 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 AC010624.4-201ENST00000597606 1351 ntBASIC5.71□□□□□ -1.5
RFC3P40938 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFC3P40938 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFC3P40938 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RFC3P40938 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RFC3P40938 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RFC3P40938 RN7SKP275-201ENST00000364626 301 ntBASIC5.71□□□□□ -1.5
RFC3P40938 RN7SKP15-201ENST00000364742 309 ntBASIC5.71□□□□□ -1.5
RFC3P40938 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 SNORA51.9-201ENST00000384295 124 ntBASIC5.71□□□□□ -1.5
RFC3P40938 U3.43-201ENST00000410734 213 ntBASIC5.71□□□□□ -1.5
RFC3P40938 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.71□□□□□ -1.5
RFC3P40938 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 RPL6P30-201ENST00000443382 862 ntBASIC5.71□□□□□ -1.5
RFC3P40938 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 AC094085.1-201ENST00000468914 584 ntBASIC5.71□□□□□ -1.5
RFC3P40938 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
RFC3P40938 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.71□□□□□ -1.5
RFC3P40938 LDHAP1-201ENST00000509421 992 ntBASIC5.71□□□□□ -1.5
RFC3P40938 AC006499.4-201ENST00000510947 694 ntBASIC5.71□□□□□ -1.5
RFC3P40938 Y_RNA.710-201ENST00000516975 110 ntBASIC5.71□□□□□ -1.5
RFC3P40938 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 IGKV3D-25-201ENST00000519599 235 ntBASIC5.71□□□□□ -1.5
RFC3P40938 IGKV2-4-201ENST00000523070 340 ntBASIC5.71□□□□□ -1.5
RFC3P40938 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.71□□□□□ -1.5
RFC3P40938 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.71□□□□□ -1.5
RFC3P40938 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC3P40938 AC092865.1-201ENST00000544395 1023 ntBASIC5.71□□□□□ -1.5
RFC3P40938 AC079905.1-201ENST00000549280 475 ntBASIC5.71□□□□□ -1.5
RFC3P40938 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC3P40938 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.71□□□□□ -1.5
RFC3P40938 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC3P40938 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms