Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL8A1P27658 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC7.07□□□□□ -1.28
COL8A1P27658 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 AC022507.1-201ENST00000548349 1505 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC7.06□□□□□ -1.28
COL8A1P27658 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 NXF4-202ENST00000416098 1465 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 AC079178.2-201ENST00000439323 1624 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.06□□□□□ -1.28
COL8A1P27658 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 RNA5SP448-201ENST00000363151 111 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 RNA5SP429-201ENST00000363688 109 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 AL121878.1-201ENST00000418638 859 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 AC231533.2-201ENST00000419045 978 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AC008155.1-201ENST00000421078 329 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 MTCO1P20-201ENST00000425366 358 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 RPL21P43-201ENST00000425440 472 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.06□□□□□ -1.28
COL8A1P27658 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL8A1P27658 CYCSP42-201ENST00000450823 238 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 SULT1D1P-201ENST00000458020 882 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 RPL34P22-201ENST00000468193 318 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 KLRA1P-201ENST00000503499 986 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AC104136.1-201ENST00000512969 394 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 AC027026.1-201ENST00000532323 742 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 OR4A40P-201ENST00000533878 948 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.06□□□□□ -1.28
COL8A1P27658 AC125612.1-201ENST00000547580 377 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.06□□□□□ -1.28
COL8A1P27658 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL8A1P27658 AC008737.2-201ENST00000599446 118 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 BNIP3P26-201ENST00000600827 554 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 BNIP3P15-201ENST00000604600 301 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AL133255.1-201ENST00000606374 441 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 AC073862.4-201ENST00000622982 854 ntBASIC7.06□□□□□ -1.28
COL8A1P27658 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC7.06□□□□□ -1.28
COL8A1P27658 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.06□□□□□ -1.28
COL8A1P27658 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC7.06□□□□□ -1.28
COL8A1P27658 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.06□□□□□ -1.28
COL8A1P27658 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
COL8A1P27658 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL8A1P27658 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
COL8A1P27658 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.05□□□□□ -1.28
COL8A1P27658 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.05□□□□□ -1.28
COL8A1P27658 AC096642.1-201ENST00000612055 2614 ntBASIC7.05□□□□□ -1.28
COL8A1P27658 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
COL8A1P27658 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 AC020549.1-201ENST00000536916 1440 ntBASIC7.05□□□□□ -1.28
COL8A1P27658 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL8A1P27658 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms