Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
TPM1P09493 OR8Q1P-201ENST00000526467 655 ntBASIC6.67□□□□□ -1.34
TPM1P09493 PSMC1P8-201ENST00000536820 1296 ntBASIC6.67□□□□□ -1.34
TPM1P09493 OOSP1P2-201ENST00000579644 351 ntBASIC6.67□□□□□ -1.34
TPM1P09493 RN7SL475P-201ENST00000583379 298 ntBASIC6.67□□□□□ -1.34
TPM1P09493 AL031429.2-201ENST00000602605 649 ntBASIC6.67□□□□□ -1.34
TPM1P09493 AC083964.1-201ENST00000607549 630 ntBASIC6.67□□□□□ -1.34
TPM1P09493 MIR8082-201ENST00000612488 81 ntBASIC6.67□□□□□ -1.34
TPM1P09493 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM1P09493 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.67□□□□□ -1.34
TPM1P09493 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM1P09493 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM1P09493 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM1P09493 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM1P09493 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.67□□□□□ -1.34
TPM1P09493 AC125336.1-201ENST00000508893 2827 ntBASIC6.67□□□□□ -1.34
TPM1P09493 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
TPM1P09493 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM1P09493 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TPM1P09493 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
TPM1P09493 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
TPM1P09493 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 RNU1-49P-201ENST00000363468 159 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AL353133.1-201ENST00000407695 401 ntBASIC6.66□□□□□ -1.34
TPM1P09493 SNORA77.2-201ENST00000408571 112 ntBASIC6.66□□□□□ -1.34
TPM1P09493 RN7SKP166-201ENST00000410812 305 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AL139135.1-201ENST00000412675 209 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM1P09493 SUMO2P8-201ENST00000434672 286 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AC013403.1-201ENST00000436954 263 ntBASIC6.66□□□□□ -1.34
TPM1P09493 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.66□□□□□ -1.34
TPM1P09493 RN7SL350P-201ENST00000492591 299 ntBASIC6.66□□□□□ -1.34
TPM1P09493 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.66□□□□□ -1.34
TPM1P09493 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.66□□□□□ -1.34
TPM1P09493 AC130366.1-201ENST00000526505 1192 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AP001858.2-201ENST00000536213 601 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM1P09493 HMGN2P47-201ENST00000559378 272 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM1P09493 AC002069.2-201ENST00000603580 883 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM1P09493 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.66□□□□□ -1.34
TPM1P09493 AC117503.3-201ENST00000623811 601 ntBASIC6.66□□□□□ -1.34
TPM1P09493 AC079776.5-201ENST00000641920 211 ntBASIC6.66□□□□□ -1.34
TPM1P09493 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.66□□□□□ -1.34
TPM1P09493 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM1P09493 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM1P09493 AP000473.2-201ENST00000602659 1537 ntBASIC6.66□□□□□ -1.34
TPM1P09493 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM1P09493 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TPM1P09493 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.65□□□□□ -1.34
TPM1P09493 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.65□□□□□ -1.34
TPM1P09493 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
TPM1P09493 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM1P09493 THAP12P9-201ENST00000503971 2360 ntBASIC6.65□□□□□ -1.34
TPM1P09493 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM1P09493 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM1P09493 SNORA7A-201ENST00000384765 139 ntBASIC6.65□□□□□ -1.34
TPM1P09493 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TPM1P09493 RN7SKP121-201ENST00000410842 305 ntBASIC6.65□□□□□ -1.34
TPM1P09493 RNA5SP155-201ENST00000411154 129 ntBASIC6.65□□□□□ -1.34
TPM1P09493 PTCD2P2-201ENST00000415579 1095 ntBASIC6.65□□□□□ -1.34
TPM1P09493 RPS27AP6-201ENST00000427962 448 ntBASIC6.65□□□□□ -1.34
TPM1P09493 BX119904.3-201ENST00000428194 957 ntBASIC6.65□□□□□ -1.34
TPM1P09493 SOCS5P1-201ENST00000440415 949 ntBASIC6.65□□□□□ -1.34
TPM1P09493 GTF2IP14-201ENST00000441415 586 ntBASIC6.65□□□□□ -1.34
TPM1P09493 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM1P09493 AC079080.1-201ENST00000479841 822 ntBASIC6.65□□□□□ -1.34
TPM1P09493 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.65□□□□□ -1.34
TPM1P09493 CCDC11P1-201ENST00000503137 1162 ntBASIC6.65□□□□□ -1.34
TPM1P09493 KHDC1P1-201ENST00000511053 508 ntBASIC6.65□□□□□ -1.34
TPM1P09493 Y_RNA.710-201ENST00000516975 110 ntBASIC6.65□□□□□ -1.34
TPM1P09493 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM1P09493 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
TPM1P09493 AP002004.1-206ENST00000532441 876 ntBASIC6.65□□□□□ -1.34
TPM1P09493 AC244502.2-201ENST00000543361 851 ntBASIC6.65□□□□□ -1.34
TPM1P09493 OR4C49P-201ENST00000563891 900 ntBASIC6.65□□□□□ -1.34
TPM1P09493 PPIAP14-201ENST00000577627 496 ntBASIC6.65□□□□□ -1.34
TPM1P09493 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TPM1P09493 RNU4ATAC-201ENST00000580972 127 ntBASIC6.65□□□□□ -1.34
TPM1P09493 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.65□□□□□ -1.34
TPM1P09493 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.65□□□□□ -1.34
TPM1P09493 AC141002.1-201ENST00000607025 279 ntBASIC6.65□□□□□ -1.34
TPM1P09493 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.65□□□□□ -1.34
TPM1P09493 RN7SL261P-201ENST00000613441 282 ntBASIC6.65□□□□□ -1.34
TPM1P09493 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.65□□□□□ -1.34
TPM1P09493 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM1P09493 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TPM1P09493 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM1P09493 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM1P09493 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TPM1P09493 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms