Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 AP001858.2-201ENST00000536213 601 ntBASIC5.13□□□□□ -1.59
CD74P04233 AC092865.1-201ENST00000544395 1023 ntBASIC5.13□□□□□ -1.59
CD74P04233 RPL3P13-201ENST00000550415 216 ntBASIC5.13□□□□□ -1.59
CD74P04233 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.13□□□□□ -1.59
CD74P04233 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD74P04233 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.13□□□□□ -1.59
CD74P04233 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.13□□□□□ -1.59
CD74P04233 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CD74P04233 RN7SL261P-201ENST00000613441 282 ntBASIC5.13□□□□□ -1.59
CD74P04233 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.13□□□□□ -1.59
CD74P04233 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.13□□□□□ -1.59
CD74P04233 AC117503.3-201ENST00000623811 601 ntBASIC5.13□□□□□ -1.59
CD74P04233 AC005618.4-201ENST00000625053 554 ntBASIC5.13□□□□□ -1.59
CD74P04233 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 AC027559.1-201ENST00000636288 271 ntBASIC5.13□□□□□ -1.59
CD74P04233 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CD74P04233 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.13□□□□□ -1.59
CD74P04233 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD74P04233 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD74P04233 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD74P04233 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD74P04233 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.13□□□□□ -1.59
CD74P04233 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.13□□□□□ -1.59
CD74P04233 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CD74P04233 SMG1P5-202ENST00000529428 4219 ntBASIC5.12□□□□□ -1.59
CD74P04233 SMG1P2-201ENST00000566127 4221 ntBASIC5.12□□□□□ -1.59
CD74P04233 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
CD74P04233 AP001284.1-201ENST00000528393 2118 ntBASIC5.12□□□□□ -1.59
CD74P04233 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CD74P04233 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.12□□□□□ -1.59
CD74P04233 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 THAP12P9-201ENST00000503971 2360 ntBASIC5.12□□□□□ -1.59
CD74P04233 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD74P04233 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CD74P04233 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CD74P04233 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 RN7SKP191-201ENST00000364713 306 ntBASIC5.12□□□□□ -1.59
CD74P04233 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.12□□□□□ -1.59
CD74P04233 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD74P04233 SNORA5.1-201ENST00000384275 131 ntBASIC5.12□□□□□ -1.59
CD74P04233 EEF1GP6-201ENST00000402309 905 ntBASIC5.12□□□□□ -1.59
CD74P04233 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 RN7SKP279-201ENST00000411383 298 ntBASIC5.12□□□□□ -1.59
CD74P04233 MYL6P5-201ENST00000412707 459 ntBASIC5.12□□□□□ -1.59
CD74P04233 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.12□□□□□ -1.59
CD74P04233 RPS7P14-201ENST00000426405 583 ntBASIC5.12□□□□□ -1.59
CD74P04233 NPM1P18-201ENST00000434232 732 ntBASIC5.12□□□□□ -1.59
CD74P04233 CHCHD4P5-201ENST00000436684 427 ntBASIC5.12□□□□□ -1.59
CD74P04233 AL592114.2-201ENST00000440142 532 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD74P04233 AC073072.2-201ENST00000447425 348 ntBASIC5.12□□□□□ -1.59
CD74P04233 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 FRG2FP-204ENST00000453982 852 ntBASIC5.12□□□□□ -1.59
CD74P04233 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD74P04233 RN7SL836P-201ENST00000476140 296 ntBASIC5.12□□□□□ -1.59
CD74P04233 RN7SL326P-201ENST00000477493 296 ntBASIC5.12□□□□□ -1.59
CD74P04233 RPL21P42-201ENST00000488408 464 ntBASIC5.12□□□□□ -1.59
CD74P04233 MTCO1P55-201ENST00000489829 745 ntBASIC5.12□□□□□ -1.59
CD74P04233 CCDC11P1-201ENST00000503137 1162 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 AC018645.1-201ENST00000505003 109 ntBASIC5.12□□□□□ -1.59
CD74P04233 ASNSP4-201ENST00000511103 447 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC137549.1-201ENST00000514243 533 ntBASIC5.12□□□□□ -1.59
CD74P04233 RNA5SP96-201ENST00000516041 107 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.12□□□□□ -1.59
CD74P04233 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.12□□□□□ -1.59
CD74P04233 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CD74P04233 AC090826.1-203ENST00000569235 490 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC091932.1-201ENST00000569381 427 ntBASIC5.12□□□□□ -1.59
CD74P04233 AL163952.1-202ENST00000569625 600 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.12□□□□□ -1.59
CD74P04233 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.12□□□□□ -1.59
CD74P04233 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 AL137000.1-201ENST00000610528 1244 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC010998.3-201ENST00000613871 631 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC015712.7-201ENST00000615211 635 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC005514.1-201ENST00000623521 208 ntBASIC5.12□□□□□ -1.59
CD74P04233 SNX18P12-201ENST00000624821 759 ntBASIC5.12□□□□□ -1.59
CD74P04233 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD74P04233 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 AC024587.1-201ENST00000505925 2157 ntBASIC5.12□□□□□ -1.59
CD74P04233 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CD74P04233 UGT2B24P-201ENST00000514441 1597 ntBASIC5.12□□□□□ -1.59
CD74P04233 AC130304.1-201ENST00000622942 2385 ntBASIC5.12□□□□□ -1.59
CD74P04233 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms