Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OFD1P17-201ENST00000437639 3018 ntBASIC6.1□□□□□ -1.43
LDLRP01130 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
LDLRP01130 AC233968.1-201ENST00000611212 1300 ntBASIC6.1□□□□□ -1.43
LDLRP01130 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 RN7SKP275-201ENST00000364626 301 ntBASIC6.1□□□□□ -1.43
LDLRP01130 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.1□□□□□ -1.43
LDLRP01130 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.1□□□□□ -1.43
LDLRP01130 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LDLRP01130 YWHAZP6-201ENST00000399764 738 ntBASIC6.1□□□□□ -1.43
LDLRP01130 RPL23AP17-201ENST00000401064 499 ntBASIC6.1□□□□□ -1.43
LDLRP01130 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 RNA5SP198-201ENST00000410376 127 ntBASIC6.1□□□□□ -1.43
LDLRP01130 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 AC110602.1-201ENST00000437414 318 ntBASIC6.1□□□□□ -1.43
LDLRP01130 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 COL11A2P1-205ENST00000441798 676 ntBASIC6.1□□□□□ -1.43
LDLRP01130 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.1□□□□□ -1.43
LDLRP01130 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.1□□□□□ -1.43
LDLRP01130 OR7L1P-201ENST00000456181 380 ntBASIC6.1□□□□□ -1.43
LDLRP01130 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 SNX18P25-201ENST00000510539 758 ntBASIC6.1□□□□□ -1.43
LDLRP01130 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 AC007068.2-201ENST00000543168 395 ntBASIC6.1□□□□□ -1.43
LDLRP01130 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
LDLRP01130 HNRNPCP1-201ENST00000556181 766 ntBASIC6.1□□□□□ -1.43
LDLRP01130 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 OR4H6P-201ENST00000563771 921 ntBASIC6.1□□□□□ -1.43
LDLRP01130 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.1□□□□□ -1.43
LDLRP01130 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.1□□□□□ -1.43
LDLRP01130 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.1□□□□□ -1.43
LDLRP01130 AL049840.5-201ENST00000602827 552 ntBASIC6.1□□□□□ -1.43
LDLRP01130 SMIM12P1-201ENST00000603004 274 ntBASIC6.1□□□□□ -1.43
LDLRP01130 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.1□□□□□ -1.43
LDLRP01130 RAB28P4-201ENST00000622233 665 ntBASIC6.1□□□□□ -1.43
LDLRP01130 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
LDLRP01130 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 AC005725.1-201ENST00000577346 2607 ntBASIC6.1□□□□□ -1.43
LDLRP01130 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
LDLRP01130 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.09□□□□□ -1.43
LDLRP01130 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 CCAT2-201ENST00000630920 1752 ntBASIC6.09□□□□□ -1.43
LDLRP01130 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
LDLRP01130 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 AC017078.1-201ENST00000416146 368 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AL360013.1-201ENST00000419031 858 ntBASIC6.09□□□□□ -1.43
LDLRP01130 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.09□□□□□ -1.43
LDLRP01130 AC092106.2-201ENST00000436597 487 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.09□□□□□ -1.43
LDLRP01130 DNAJA1P5-201ENST00000440278 943 ntBASIC6.09□□□□□ -1.43
LDLRP01130 OR13K1P-201ENST00000444577 975 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AL022237.1-201ENST00000446663 358 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AC103563.5-201ENST00000455643 364 ntBASIC6.09□□□□□ -1.43
LDLRP01130 RN7SL552P-201ENST00000462094 276 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AL355032.1-201ENST00000472981 438 ntBASIC6.09□□□□□ -1.43
LDLRP01130 RPL7P51-201ENST00000490532 749 ntBASIC6.09□□□□□ -1.43
LDLRP01130 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 AC093664.1-201ENST00000511779 289 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 OR4A40P-201ENST00000533878 948 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AC140063.1-201ENST00000541343 259 ntBASIC6.09□□□□□ -1.43
LDLRP01130 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.09□□□□□ -1.43
LDLRP01130 MIR4443-201ENST00000585052 53 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.09□□□□□ -1.43
LDLRP01130 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 AL589765.6-201ENST00000601909 549 ntBASIC6.09□□□□□ -1.43
LDLRP01130 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms