Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL137067.2-201ENST00000621202 131 ntBASIC4.12□□□□□ -1.75
NDUFA1O15239 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.12□□□□□ -1.75
NDUFA1O15239 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.12□□□□□ -1.75
NDUFA1O15239 AC068213.1-201ENST00000625124 226 ntBASIC4.12□□□□□ -1.75
NDUFA1O15239 CLUHP10-201ENST00000631979 980 ntBASIC4.12□□□□□ -1.75
NDUFA1O15239 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.12□□□□□ -1.75
NDUFA1O15239 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDUFA1O15239 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NDUFA1O15239 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDUFA1O15239 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDUFA1O15239 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NDUFA1O15239 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
NDUFA1O15239 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.12□□□□□ -1.75
NDUFA1O15239 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDUFA1O15239 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.12□□□□□ -1.75
NDUFA1O15239 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.12□□□□□ -1.75
NDUFA1O15239 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDUFA1O15239 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDUFA1O15239 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.12□□□□□ -1.75
NDUFA1O15239 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.12□□□□□ -1.75
NDUFA1O15239 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 AC079248.1-201ENST00000427568 1546 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
NDUFA1O15239 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NDUFA1O15239 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 RN7SKP69-201ENST00000365390 305 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
NDUFA1O15239 MIR27A-201ENST00000385073 78 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.11□□□□□ -1.75
NDUFA1O15239 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 MTND2P40-201ENST00000436718 841 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AL354872.1-201ENST00000456361 967 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 RN7SL552P-201ENST00000462094 276 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AC022730.1-201ENST00000473114 568 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 RN7SL369P-201ENST00000477138 299 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 RN7SL326P-201ENST00000477493 296 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 DEFB109A-201ENST00000482450 265 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 RN7SL267P-201ENST00000485107 261 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AC009567.2-201ENST00000502989 349 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AC027216.1-201ENST00000577726 685 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AC100832.2-201ENST00000582080 776 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AC005332.4-201ENST00000592752 579 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AC036176.3-201ENST00000602456 418 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AL512430.4-201ENST00000603085 613 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 AC073046.2-201ENST00000604756 527 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.11□□□□□ -1.75
NDUFA1O15239 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.11□□□□□ -1.75
NDUFA1O15239 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 OR7A1P-202ENST00000641542 1158 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NDUFA1O15239 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NDUFA1O15239 THAP12P9-201ENST00000503971 2360 ntBASIC4.11□□□□□ -1.75
NDUFA1O15239 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDUFA1O15239 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NDUFA1O15239 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NDUFA1O15239 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
NDUFA1O15239 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.1□□□□□ -1.75
NDUFA1O15239 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.1□□□□□ -1.75
NDUFA1O15239 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.1□□□□□ -1.75
NDUFA1O15239 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.1□□□□□ -1.75
NDUFA1O15239 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDUFA1O15239 RNA5SP485-201ENST00000365053 119 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms