Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC120036.2-201ENST00000509729 1474 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM1O00151 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 AC004023.1-201ENST00000561473 1744 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 AF287957.1-201ENST00000607368 1595 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AC092692.1-201ENST00000623625 2595 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM1O00151 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 AC010894.1-201ENST00000313760 361 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 RNU1-5P-201ENST00000362684 144 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PDLIM1O00151 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM1O00151 FDPSP5-201ENST00000399474 1057 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AC079809.1-201ENST00000415468 276 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 CDC42P6-201ENST00000421246 576 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM1O00151 MTND2P40-201ENST00000436718 841 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM1O00151 AC073476.1-201ENST00000452854 407 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 NPM1P9-201ENST00000453156 844 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 RN7SL83P-201ENST00000468131 297 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AC090142.2-201ENST00000483263 416 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 RPS7P11-201ENST00000484240 586 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM1O00151 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PDLIM1O00151 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 TMEM97P2-201ENST00000517841 403 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM1O00151 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM1O00151 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.94□□□□□ -1.46
PDLIM1O00151 OR8Q1P-201ENST00000526467 655 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM1O00151 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM1O00151 CHEK2P2-201ENST00000554701 672 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM1O00151 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM1O00151 AC027796.1-201ENST00000575593 512 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 MIR3189-201ENST00000578735 73 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 RPL7AP69-201ENST00000595306 806 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM1O00151 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AL139041.1-201ENST00000605480 610 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 FAM72A-208ENST00000607379 1139 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 AC073488.9-201ENST00000631601 754 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM1O00151 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 AL078621.3-201ENST00000623707 2042 ntBASIC5.94□□□□□ -1.46
PDLIM1O00151 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM1O00151 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
PDLIM1O00151 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 AC019178.1-201ENST00000392337 440 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 OOSP1-201ENST00000398992 1270 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 AC015977.1-201ENST00000418887 292 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM1O00151 AC003989.1-201ENST00000434569 565 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 WDR82P2-201ENST00000444540 928 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.93□□□□□ -1.46
PDLIM1O00151 AP003385.3-201ENST00000472498 287 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 RN7SL70P-201ENST00000478322 302 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC023424.1-201ENST00000496058 459 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC008945.1-201ENST00000505144 499 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 RN7SKP196-201ENST00000516267 345 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC008429.2-201ENST00000523057 864 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM1O00151 OR4C49P-201ENST00000563891 900 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 AC007066.2-202ENST00000566531 914 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 DPRXP4-201ENST00000578053 568 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM1O00151 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM1O00151 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.93□□□□□ -1.46
PDLIM1O00151 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms