Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AP003080.1-202ENST00000526526 915 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 GTF2IP11-201ENST00000526931 420 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 CASC19-274ENST00000642018 970 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 AC018717.1-201ENST00000457712 1505 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ZNF402P-201ENST00000404435 3100 ntBASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4BQ9Y4P1 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 CCNT2P1-201ENST00000423082 1315 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 EIF3EP1-201ENST00000433978 1316 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 RNU1-65P-201ENST00000363919 148 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 RNA5SP279-201ENST00000365513 117 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 GAPDHP59-201ENST00000435908 267 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC093166.3-201ENST00000448785 303 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC018797.1-201ENST00000510791 255 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 Vault.2-201ENST00000516519 98 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 RNA5SP441-201ENST00000516809 88 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC090115.2-201ENST00000548060 883 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC090286.3-201ENST00000573133 187 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AL135999.3-201ENST00000610501 812 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 uc_338.31-201ENST00000615595 186 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 MIR6721-201ENST00000617181 87 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC005899.7-201ENST00000618199 588 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC063952.1-203ENST00000634410 658 ntBASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4BQ9Y4P1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AC024587.1-201ENST00000505925 2157 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 RN7SKP237-201ENST00000364663 301 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 RBBP4P5-201ENST00000398583 1266 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 OOSP1-201ENST00000398992 1270 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 YWHAZP6-201ENST00000399764 738 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 HMGA1P8-201ENST00000414130 321 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AC079922.1-201ENST00000443291 359 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 AL590004.3-202ENST00000445883 451 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 VN1R96P-201ENST00000446052 858 ntBASIC5.85□□□□□ -1.47
ATG4BQ9Y4P1 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms