Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RN7SL91P-201ENST00000469313 291 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 RN7SL714P-201ENST00000487050 298 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 TRBV5-2-201ENST00000489095 273 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 USP9YP2-201ENST00000504503 1000 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 USP9YP1-201ENST00000513521 1002 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AC093878.1-201ENST00000515630 432 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 snoU109.5-201ENST00000516231 132 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 SCARNA11.1-201ENST00000516918 132 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 MIR4262-201ENST00000578394 54 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AP001357.1-201ENST00000586304 1053 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AC020916.2-201ENST00000591242 360 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 MIR7848-201ENST00000617402 101 ntBASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KCNIP3Q9Y2W7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 PPIAP24-201ENST00000328558 471 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 RNA5SP301-201ENST00000362537 121 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SNORA5.1-201ENST00000384275 131 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 FDPSP5-201ENST00000399474 1057 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 RPSAP44-201ENST00000406712 884 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC091492.1-201ENST00000419844 272 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC013268.2-201ENST00000420753 337 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 GYG1P2-201ENST00000426437 1006 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 RPSAP65-201ENST00000429660 595 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 RPS21P1-201ENST00000434479 247 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC092106.2-201ENST00000436597 487 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 RPL23AP60-201ENST00000450011 454 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC073594.1-201ENST00000462065 364 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC124945.1-201ENST00000485133 188 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 GOLGA5P1-201ENST00000507317 980 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 CARSP2-201ENST00000520688 277 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 TPM3P3-201ENST00000521343 354 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 TPRX1P1-201ENST00000557620 319 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC092718.4-201ENST00000566639 716 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC025857.2-201ENST00000602711 238 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SNORD96A-201ENST00000606577 79 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 AC126474.2-201ENST00000623268 1750 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 OR9K1P-202ENST00000641111 3217 ntBASIC5.13□□□□□ -1.59
KCNIP3Q9Y2W7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms