Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 AL049634.1-201ENST00000453770 1720 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 LINC02019-201ENST00000608605 2060 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 AL121776.1-201ENST00000429337 372 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 RAB28P2-201ENST00000454299 641 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 SNORA43.3-201ENST00000517240 103 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 AC007494.1-201ENST00000562293 760 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 AC091193.1-201ENST00000604640 448 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 AC007842.1-201ENST00000597336 2039 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN11AQ9UI33 USP9YP3-201ENST00000434481 1766 ntBASIC7.62□□□□□ -1.19
SCN11AQ9UI33 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC006213.6-201ENST00000623722 4179 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 RNA5SP514-201ENST00000363717 111 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 NPM1P4-201ENST00000414095 812 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC007386.1-201ENST00000455212 582 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC074087.1-201ENST00000512059 724 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 IGKV2-18-201ENST00000522607 343 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 OR4A42P-201ENST00000531397 938 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AL139099.4-201ENST00000614802 114 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AL355974.3-201ENST00000617383 467 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC131649.2-201ENST00000624925 4439 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 RAD17P2-201ENST00000451754 1977 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 RN7SKP216-201ENST00000411050 312 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 GABARAPL3-201ENST00000412799 354 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 MRPL53P1-201ENST00000414323 319 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC007394.1-201ENST00000421941 531 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AL390119.1-201ENST00000440329 312 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC022215.1-201ENST00000481770 362 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 CYP4F27P-201ENST00000514557 494 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 MRPS16P1-201ENST00000523462 412 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC027026.1-201ENST00000532323 742 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AC090651.1-201ENST00000567865 634 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AP001496.3-201ENST00000580230 913 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 SUMO2P15-201ENST00000604285 278 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AP000864.1-201ENST00000609424 650 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 AP003119.3-201ENST00000566747 4192 ntBASIC7.61□□□□□ -1.19
SCN11AQ9UI33 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN11AQ9UI33 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.6□□□□□ -1.19
SCN11AQ9UI33 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms