Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 RPL12P31-201ENST00000478433 450 ntBASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AC098818.1-201ENST00000478593 252 ntBASIC6.37□□□□□ -1.39
PCDH9Q9HC56 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 HMGN1P16-201ENST00000508308 283 ntBASIC6.37□□□□□ -1.39
PCDH9Q9HC56 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AC011500.1-201ENST00000601963 469 ntBASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AL137067.2-201ENST00000621202 131 ntBASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AC021422.1-201ENST00000621212 473 ntBASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AC010329.1-201ENST00000593903 8328 ntBASIC6.37□□□□□ -1.39
PCDH9Q9HC56 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDH9Q9HC56 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 CCAT2-201ENST00000630920 1752 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 BX284613.1-201ENST00000452221 1641 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 MTCO1P8-201ENST00000416914 1523 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC092724.1-201ENST00000624623 3397 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 FUNDC2P3-201ENST00000334716 533 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 RN7SKP121-201ENST00000410842 305 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 VN1R20P-201ENST00000425215 966 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AL365220.1-201ENST00000432923 399 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AL731534.1-201ENST00000434711 269 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC013403.1-201ENST00000436954 263 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC096632.2-201ENST00000438139 1239 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AL512637.1-201ENST00000439523 1231 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 SOCS5P1-201ENST00000440415 949 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC002075.1-201ENST00000457396 676 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 RPL9P15-201ENST00000491096 532 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC092349.1-201ENST00000504903 310 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 OR4D12P-201ENST00000509361 911 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 KHDC1P1-201ENST00000511053 508 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 SNORA48.9-201ENST00000516419 162 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 RNU6-551P-201ENST00000516661 103 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 RNA5SP206-201ENST00000516703 121 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AP003033.2-201ENST00000528901 805 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AP001858.2-201ENST00000536213 601 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 MIR132-201ENST00000591554 101 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC010998.3-201ENST00000613871 631 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC022164.1-201ENST00000568767 2673 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AC090220.1-201ENST00000593078 1699 ntBASIC6.36□□□□□ -1.39
PCDH9Q9HC56 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PCDH9Q9HC56 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AC006600.2-201ENST00000624834 2506 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 RN7SKP250-201ENST00000363924 321 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AC240504.1-201ENST00000395709 845 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AL121977.1-201ENST00000401636 979 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 THEM7P-201ENST00000419556 672 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 IGLV3-4-201ENST00000432300 244 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 RPSAP32-201ENST00000432681 526 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 GAPDHP23-201ENST00000444823 993 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AC007383.1-201ENST00000445875 636 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 RAB28P2-201ENST00000454299 641 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 RPS27P20-201ENST00000492051 246 ntBASIC6.35□□□□□ -1.39
PCDH9Q9HC56 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH9Q9HC56 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms