Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AL136984.1-201ENST00000607611 1893 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 NCOA4P2-201ENST00000340589 1813 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 RN7SKP257-201ENST00000364525 309 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 MIR433-201ENST00000384837 93 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AL360271.1-201ENST00000395679 510 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 PRUNEP1-201ENST00000425846 705 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC010086.1-201ENST00000437359 1052 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC079922.1-201ENST00000443291 359 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 RN7SL714P-201ENST00000487050 298 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC093816.1-201ENST00000515076 913 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 RNA5SP400-201ENST00000517155 111 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC131935.1-201ENST00000524621 333 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AP001804.2-201ENST00000533932 910 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC027796.1-201ENST00000575593 512 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 MIR3189-201ENST00000578735 73 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AL352984.2-201ENST00000611153 546 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AOX3P-204ENST00000491025 2107 ntBASIC6.07□□□□□ -1.44
BRF2Q9HAW0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.07□□□□□ -1.44
BRF2Q9HAW0 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 OR56A4-201ENST00000330728 1209 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AL033519.1-201ENST00000407266 307 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AL356806.1-201ENST00000422524 916 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 GPN3P1-201ENST00000423883 535 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MTATP6P11-201ENST00000428071 670 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MTCO1P45-201ENST00000431457 267 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 SNRPFP2-201ENST00000440710 251 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 WDR82P2-201ENST00000444540 928 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AL500527.1-201ENST00000448532 255 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AL034369.1-201ENST00000453808 477 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 RPL7L1P3-201ENST00000455249 689 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC114728.1-201ENST00000488289 483 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 AC093325.1-201ENST00000508378 326 ntBASIC6.06□□□□□ -1.44
BRF2Q9HAW0 RN7SKP248-201ENST00000516278 305 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms