Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AL360271.1-201ENST00000395679 510 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 MTND6P12-201ENST00000428247 522 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 CST12P-201ENST00000457644 362 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC007998.1-201ENST00000474156 672 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC093719.1-201ENST00000480427 441 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 RPL34P33-201ENST00000486062 334 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC106872.4-201ENST00000510050 523 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC006499.4-201ENST00000510947 694 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC090958.1-201ENST00000511122 351 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 CR383658.1-201ENST00000514609 734 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC068305.2-201ENST00000550567 1205 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC011445.2-201ENST00000599274 173 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 SHQ1P1-201ENST00000437111 1544 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 SNX18P3-202ENST00000565670 1750 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 HMGA1P8-201ENST00000414130 321 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AC015977.1-201ENST00000418887 292 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 RPL12P16-201ENST00000431098 498 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AL353662.1-201ENST00000439099 327 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AL022319.1-201ENST00000458183 1167 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 SLC25A51P1-201ENST00000468432 871 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AC098847.1-201ENST00000473094 348 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 RN7SKP248-201ENST00000516278 305 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 RN7SKP238-201ENST00000516483 249 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 SUMO2P19-201ENST00000518920 295 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AP003396.4-201ENST00000527574 265 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 RPA2P1-201ENST00000556557 721 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 MIR6768-201ENST00000610734 72 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 MIR6886-201ENST00000619864 61 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AC024651.2-201ENST00000562480 2098 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 AP000547.3-204ENST00000588548 2523 ntBASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.46□□□□□ -1.21
RPAP1Q9BWH6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 RNA5SP273-201ENST00000362484 113 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 MIR433-201ENST00000384837 93 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 RPL23AP18-201ENST00000416139 468 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 ATP5LP2-201ENST00000440646 311 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 AC016908.1-201ENST00000442571 1219 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 RNA5SP434-201ENST00000516647 121 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 RNA5SP271-201ENST00000516700 88 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 OR6M2P-201ENST00000529831 871 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 AC090236.2-201ENST00000587933 1101 ntBASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms