Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 AL356968.2-201ENST00000412769 1257 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AMD1P2-201ENST00000412936 992 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 ARHGAP42P2-201ENST00000416089 2140 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC011753.4-201ENST00000417974 311 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC007435.1-201ENST00000421086 415 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.79□□□□□ -1
LRCH3Q96II8 DEFA9P-201ENST00000433042 285 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 OR52B5P-201ENST00000435337 951 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC092170.1-201ENST00000440211 356 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 EIF5AP4-201ENST00000441206 465 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 KF459542.1-201ENST00000450908 553 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.79□□□□□ -1
LRCH3Q96II8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.79□□□□□ -1
LRCH3Q96II8 RBMY2EP-202ENST00000456360 940 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC019084.1-201ENST00000457337 432 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC022336.1-201ENST00000475510 337 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.79□□□□□ -1
LRCH3Q96II8 LARP1BP2-201ENST00000486594 519 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.79□□□□□ -1
LRCH3Q96II8 SAP18P1-201ENST00000512058 390 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.79□□□□□ -1
LRCH3Q96II8 AC090835.1-201ENST00000515189 1024 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC8.79□□□□□ -1
LRCH3Q96II8 AC130366.1-201ENST00000526505 1192 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.79□□□□□ -1
LRCH3Q96II8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.79□□□□□ -1
LRCH3Q96II8 AC007424.1-203ENST00000554613 687 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 PSMB7P1-201ENST00000556349 514 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC107958.1-201ENST00000556576 290 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC8.79□□□□□ -1
LRCH3Q96II8 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.79□□□□□ -1
LRCH3Q96II8 Z95327.3-201ENST00000610385 572 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.79□□□□□ -1
LRCH3Q96II8 AC116563.2-201ENST00000624751 535 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AP003400.3-201ENST00000624904 346 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.79□□□□□ -1
LRCH3Q96II8 AC134503.1-201ENST00000633048 54 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC8.79□□□□□ -1
LRCH3Q96II8 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 ZNF300P1-201ENST00000356555 1822 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
LRCH3Q96II8 VN2R1P-201ENST00000449668 1743 ntBASIC8.79□□□□□ -1
LRCH3Q96II8 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC8.79□□□□□ -1
LRCH3Q96II8 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.79□□□□□ -1
LRCH3Q96II8 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
LRCH3Q96II8 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.79□□□□□ -1
LRCH3Q96II8 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 AC011297.1-201ENST00000620503 2110 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.78□□□□□ -1
LRCH3Q96II8 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
LRCH3Q96II8 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.78□□□□□ -1
LRCH3Q96II8 NCAPD2P1-201ENST00000432906 1801 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC017007.4-201ENST00000503353 1352 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.78□□□□□ -1
LRCH3Q96II8 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.78□□□□□ -1
LRCH3Q96II8 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.78□□□□□ -1
LRCH3Q96II8 Y_RNA.133-201ENST00000363428 110 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 SNORA58.1-201ENST00000364133 136 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 RNU6-707P-201ENST00000364647 95 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 SNORD86-201ENST00000391196 86 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 Z97832.1-201ENST00000402490 328 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.78□□□□□ -1
LRCH3Q96II8 PKMP3-201ENST00000405497 715 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 PSMD8P1-201ENST00000436275 769 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 SUMO1P3-201ENST00000439961 304 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC016691.1-201ENST00000441321 413 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AL356133.1-201ENST00000444762 372 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.78□□□□□ -1
LRCH3Q96II8 AC239798.1-201ENST00000449024 1176 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC016724.1-201ENST00000453215 421 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AL513533.1-201ENST00000453728 415 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.78□□□□□ -1
LRCH3Q96II8 OFD1P4Y-201ENST00000455273 1179 ntBASIC8.78□□□□□ -1
LRCH3Q96II8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC8.78□□□□□ -1
LRCH3Q96II8 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC8.78□□□□□ -1
LRCH3Q96II8 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms