Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNRPEP8-201ENST00000442866 260 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 OR4G11P-201ENST00000492842 939 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 RPL23AP80-201ENST00000495605 424 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AL121839.1-201ENST00000556233 1185 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC092868.1-201ENST00000557949 802 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 MT1L-202ENST00000566367 78 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC009220.3-201ENST00000604318 586 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AL353763.2-201ENST00000623489 1903 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AC139426.3-201ENST00000605648 2059 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF135Q8IUD6 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.2□□□□□ -1.1
RNF135Q8IUD6 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 Y_RNA.303-201ENST00000364998 94 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 ATP5HP3-201ENST00000396994 486 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 RPS15AP38-201ENST00000413110 372 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 MICG-208ENST00000416822 132 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 OR6K4P-201ENST00000423179 955 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 GTF2IP23-201ENST00000423746 351 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 FO393419.3-201ENST00000428741 282 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 ELOCP10-201ENST00000440624 327 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC002542.1-201ENST00000440683 193 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 RPL36AP33-201ENST00000450395 310 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 RPL31P58-201ENST00000469001 379 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 FCF1P3-201ENST00000496394 590 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 RN7SL649P-201ENST00000496974 275 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC109445.1-201ENST00000512356 383 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AP001207.1-201ENST00000524051 481 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 AC044913.1-201ENST00000557200 430 ntBASIC8.19□□□□□ -1.1
RNF135Q8IUD6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC8.19□□□□□ -1.1
RNF135Q8IUD6 ATP5F1P7-201ENST00000567330 760 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms