Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL512637.1-201ENST00000439523 1231 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AL122020.1-201ENST00000472287 459 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 MIR4489-201ENST00000578869 62 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 MIR4776-2-201ENST00000580204 80 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AL049840.6-201ENST00000604583 345 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 MIR8089-201ENST00000620165 82 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 OR8G3P-202ENST00000641572 1255 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AC123769.1-201ENST00000530992 3192 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AC011416.1-201ENST00000514947 1732 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AL136531.3-201ENST00000624378 3658 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 SPATA31C1-201ENST00000420021 3895 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 RNU1-150P-201ENST00000362491 162 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 SNORA81-201ENST00000408493 178 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 RN7SKP278-201ENST00000410504 342 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 BX323845.3-201ENST00000428215 527 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC091390.2-201ENST00000432573 374 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 CLUHP1-201ENST00000435012 1190 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC013410.1-201ENST00000436223 1232 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 RNA5SP362-201ENST00000516048 118 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AP000648.1-201ENST00000529682 397 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC092865.1-201ENST00000544395 1023 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC022404.1-201ENST00000555320 273 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC016180.1-201ENST00000567945 403 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC015849.6-201ENST00000605454 474 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AL031601.1-201ENST00000605702 394 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AL034408.1-201ENST00000637712 664 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 AC093829.1-201ENST00000506662 1618 ntBASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
LYSMD4Q5XG99 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
LYSMD4Q5XG99 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms