Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC005033.1-201ENST00000428904 813 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC147055.3-201ENST00000510547 851 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AP000676.2-201ENST00000529711 301 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 OR1F2P-201ENST00000570470 933 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC119403.2-201ENST00000590960 598 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC016583.1-201ENST00000624221 2431 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC105235.1-201ENST00000623208 1816 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 EIF4A1P7-201ENST00000421800 1220 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 OR5W1P-201ENST00000423705 938 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 VN1R54P-201ENST00000435210 1049 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AC083795.1-201ENST00000491760 320 ntBASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 AC007938.2-201ENST00000604666 2634 ntBASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.85
SNAPC4Q5SXM2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AL606490.8-201ENST00000441624 319 ntBASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AC009120.1-201ENST00000493458 473 ntBASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AC072052.1-201ENST00000496556 306 ntBASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AC015720.2-201ENST00000567709 334 ntBASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 AC133644.2-201ENST00000608142 540 ntBASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC9.71□□□□□ -0.86
SNAPC4Q5SXM2 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC110716.2-201ENST00000563865 3945 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 RNA5SP478-201ENST00000364657 115 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 RPS4XP5-201ENST00000419038 768 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 OR52B5P-201ENST00000435337 951 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC073594.1-201ENST00000462065 364 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 OR51A1P-201ENST00000511110 946 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 MFSD4BP1-201ENST00000513330 1552 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC110775.1-201ENST00000513721 462 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 RN7SKP66-201ENST00000516681 231 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AL359922.2-201ENST00000581788 3017 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 AC104447.1-201ENST00000624214 2124 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 OR52B5P-202ENST00000641118 1110 ntBASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SNAPC4Q5SXM2 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SNAPC4Q5SXM2 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
SNAPC4Q5SXM2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.69□□□□□ -0.86
SNAPC4Q5SXM2 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SNAPC4Q5SXM2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms