Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.4□□□□□ -1.06
PTCH1Q13635 SPRYD7P1-201ENST00000443861 570 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 RPS27AP3-201ENST00000453803 454 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 AC104164.1-201ENST00000460282 590 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 CDH12P4-201ENST00000517835 295 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 CDH12P3-201ENST00000517935 295 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 CDH12P1-201ENST00000518435 295 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.4□□□□□ -1.06
PTCH1Q13635 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.4□□□□□ -1.06
PTCH1Q13635 MIR1269B-201ENST00000580405 75 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 AC119403.2-201ENST00000590960 598 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 AL049840.6-201ENST00000604583 345 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTCH1Q13635 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTCH1Q13635 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTCH1Q13635 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTCH1Q13635 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.4□□□□□ -1.06
PTCH1Q13635 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.07
PTCH1Q13635 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
PTCH1Q13635 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PTCH1Q13635 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PTCH1Q13635 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.07
PTCH1Q13635 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.4□□□□□ -1.07
PTCH1Q13635 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.4□□□□□ -1.07
PTCH1Q13635 CDY5P-201ENST00000411487 1580 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 CDY9P-201ENST00000451397 1580 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTCH1Q13635 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.39□□□□□ -1.07
PTCH1Q13635 OR2AT2P-201ENST00000413438 905 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 EEF1B2P6-201ENST00000445713 673 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 AC093763.2-201ENST00000505334 1223 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 RN7SKP98-201ENST00000517070 156 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC8.39□□□□□ -1.07
PTCH1Q13635 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.39□□□□□ -1.07
PTCH1Q13635 FAM27E4-201ENST00000605259 342 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 AL137246.2-201ENST00000613439 662 ntBASIC8.39□□□□□ -1.07
PTCH1Q13635 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTCH1Q13635 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.39□□□□□ -1.07
PTCH1Q13635 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTCH1Q13635 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.39□□□□□ -1.07
PTCH1Q13635 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTCH1Q13635 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PTCH1Q13635 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTCH1Q13635 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PTCH1Q13635 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTCH1Q13635 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.39□□□□□ -1.07
PTCH1Q13635 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PTCH1Q13635 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
PTCH1Q13635 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTCH1Q13635 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.38□□□□□ -1.07
PTCH1Q13635 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.38□□□□□ -1.07
PTCH1Q13635 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
PTCH1Q13635 GAPDHP24-201ENST00000328713 983 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 RN7SKP115-201ENST00000363177 317 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 AC126120.1-201ENST00000431082 470 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 AC007386.1-201ENST00000455212 582 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.38□□□□□ -1.07
PTCH1Q13635 GAPDHP71-201ENST00000511530 1003 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 AC073581.1-201ENST00000519036 575 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.38□□□□□ -1.07
PTCH1Q13635 OR56A7P-201ENST00000524865 941 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 OR4A46P-201ENST00000527255 933 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.38□□□□□ -1.07
PTCH1Q13635 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.38□□□□□ -1.07
PTCH1Q13635 ATM-229ENST00000639953 587 ntTSL 5 BASIC8.38□□□□□ -1.07
PTCH1Q13635 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 AC092692.1-201ENST00000623625 2595 ntBASIC8.38□□□□□ -1.07
PTCH1Q13635 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
PTCH1Q13635 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTCH1Q13635 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.37□□□□□ -1.07
PTCH1Q13635 RNA5SP234-201ENST00000363916 119 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL662874.1-201ENST00000426065 230 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AC097721.1-201ENST00000427150 1253 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 Z84478.1-201ENST00000438230 1219 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.37□□□□□ -1.07
PTCH1Q13635 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms