Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC090241.1-201ENST00000587732 621 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 AL353729.2-201ENST00000605859 1249 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP1Q04837 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC013489.3-201ENST00000623274 517 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP1Q04837 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SSBP1Q04837 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SSBP1Q04837 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SSBP1Q04837 RNU1-136P-201ENST00000384181 164 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 RPL12P23-201ENST00000405880 490 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC108479.1-201ENST00000431142 427 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 CR391992.1-201ENST00000438601 394 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 RPS10P18-201ENST00000442662 495 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC092421.1-201ENST00000448148 418 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 SNORD125-201ENST00000459538 96 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 CBX5P1-201ENST00000468470 561 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 RNA5SP230-201ENST00000517039 122 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 OR56A7P-201ENST00000524865 941 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP1Q04837 RPL29P33-201ENST00000587474 316 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 RPL7AP69-201ENST00000595306 806 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 HIRAP1-201ENST00000605318 787 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AL162574.1-201ENST00000615702 950 ntBASIC5.05□□□□□ -1.6
SSBP1Q04837 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSBP1Q04837 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP1Q04837 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SSBP1Q04837 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SSBP1Q04837 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP1Q04837 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSBP1Q04837 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP1Q04837 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP1Q04837 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP1Q04837 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SSBP1Q04837 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 RNA5SP375-201ENST00000362975 119 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSBP1Q04837 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC026310.1-201ENST00000396004 378 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 YWHAZP5-201ENST00000419975 730 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 HMGN2P27-201ENST00000427352 270 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 E2F6P1-201ENST00000428850 745 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms