Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC106872.5-201ENST00000508856 1416 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 AC130360.2-201ENST00000533477 1556 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CCNA1P78396 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
CCNA1P78396 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.06□□□□□ -1.28
CCNA1P78396 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CCNA1P78396 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
CCNA1P78396 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.05□□□□□ -1.28
CCNA1P78396 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CCNA1P78396 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 AL049634.1-201ENST00000453770 1720 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCNA1P78396 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCNA1P78396 AL445238.1-204ENST00000400311 463 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 AC245060.4-201ENST00000413293 1121 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.05□□□□□ -1.28
CCNA1P78396 GAPDHP75-201ENST00000433910 943 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 LYPLA1P1-201ENST00000434514 622 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 PCBP2P1-201ENST00000437262 977 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 AC009237.1-201ENST00000442127 744 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 AC064862.4-201ENST00000442180 334 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 AC016908.1-201ENST00000442571 1219 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 GAPDHP23-201ENST00000444823 993 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.05□□□□□ -1.28
CCNA1P78396 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.05□□□□□ -1.28
CCNA1P78396 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 AC092865.1-201ENST00000544395 1023 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 AC007225.2-201ENST00000562529 256 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.05□□□□□ -1.28
CCNA1P78396 RN7SL787P-201ENST00000613000 284 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 AC022467.1-201ENST00000614738 749 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CCNA1P78396 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.05□□□□□ -1.28
CCNA1P78396 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CCNA1P78396 WDR95P-201ENST00000425638 1542 ntBASIC7.05□□□□□ -1.28
CCNA1P78396 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
CCNA1P78396 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCNA1P78396 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
CCNA1P78396 AC105114.1-201ENST00000624795 1862 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.04□□□□□ -1.28
CCNA1P78396 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC073342.2-201ENST00000595842 1800 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 RBPJP7-201ENST00000442803 1447 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 RBPJP5-201ENST00000449433 1447 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 AC068733.2-201ENST00000605434 1418 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 GNL2P1-201ENST00000451274 2190 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 SNORA43.1-201ENST00000364863 140 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.04□□□□□ -1.28
CCNA1P78396 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CCNA1P78396 AL512637.1-201ENST00000439523 1231 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 AL445466.1-201ENST00000448432 357 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 RPSAP39-201ENST00000467439 883 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 UBFD1P1-201ENST00000473259 814 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.04□□□□□ -1.28
CCNA1P78396 MIR4776-2-201ENST00000580204 80 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 MIR4443-201ENST00000585052 53 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 AC004477.3-201ENST00000614061 590 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.04□□□□□ -1.28
CCNA1P78396 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 AL133243.4-201ENST00000623116 3109 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms