Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN20P56880 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLDN20P56880 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLDN20P56880 RN7SKP171-201ENST00000364417 303 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLDN20P56880 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 AL023284.3-201ENST00000407767 334 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN20P56880 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 GTF2IP14-201ENST00000441415 586 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC002075.1-201ENST00000457396 676 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN20P56880 GM2AP2-201ENST00000491764 562 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 RN7SL568P-201ENST00000493069 298 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 HMGN1P16-201ENST00000508308 283 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.8□□□□□ -1.48
CLDN20P56880 TPRX1P1-201ENST00000557620 319 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC009268.1-201ENST00000561352 1203 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN20P56880 RN7SL475P-201ENST00000583379 298 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN20P56880 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CLDN20P56880 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC005828.7-201ENST00000607331 556 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.8□□□□□ -1.48
CLDN20P56880 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC091948.2-201ENST00000636510 279 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLDN20P56880 AL121936.2-201ENST00000641935 662 ntBASIC5.8□□□□□ -1.48
CLDN20P56880 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.8□□□□□ -1.48
CLDN20P56880 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 AC090181.3-201ENST00000624777 1514 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CLDN20P56880 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN20P56880 AL353743.3-201ENST00000442109 1468 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AL353763.1-201ENST00000624467 1628 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN20P56880 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN20P56880 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CLDN20P56880 RPL11P4-201ENST00000332269 436 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 RNU6-819P-201ENST00000364116 107 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN20P56880 PSMA6P1-201ENST00000400275 741 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC002127.1-201ENST00000421305 225 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 CYCSP52-201ENST00000422857 310 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 MTATP6P11-201ENST00000428071 670 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN20P56880 CLNS1AP1-201ENST00000435954 682 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 AC114878.1-201ENST00000441166 358 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 AL500527.1-201ENST00000448532 255 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 OR6C72P-201ENST00000451403 892 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC114728.1-201ENST00000488289 483 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 NPM1P27-201ENST00000502784 830 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN20P56880 SNORA70.17-201ENST00000516449 133 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 RN7SKP183-201ENST00000517169 324 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN20P56880 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN20P56880 OR4A41P-201ENST00000533053 928 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.79□□□□□ -1.48
CLDN20P56880 AC121758.1-202ENST00000556917 658 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.79□□□□□ -1.48
CLDN20P56880 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 AC026898.1-201ENST00000586404 571 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN20P56880 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLDN20P56880 LINC01613-201ENST00000561476 2780 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 ZNF101P1-201ENST00000435701 1720 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 PPBPP2-201ENST00000513150 1362 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC010624.4-201ENST00000597606 1351 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CLDN20P56880 AC074141.1-201ENST00000588129 2995 ntBASIC5.79□□□□□ -1.48
CLDN20P56880 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.79□□□□□ -1.48
CLDN20P56880 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms