Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SUMO3P55854 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.09□□□□□ -1.44
SUMO3P55854 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.09□□□□□ -1.44
SUMO3P55854 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
SUMO3P55854 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SUMO3P55854 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
SUMO3P55854 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.09□□□□□ -1.44
SUMO3P55854 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.09□□□□□ -1.44
SUMO3P55854 AC025809.2-201ENST00000625085 1802 ntBASIC6.09□□□□□ -1.44
SUMO3P55854 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 RBPJP6-201ENST00000411556 1431 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SUMO3P55854 RNA5SP188-201ENST00000362916 129 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 CHMP1B2P-201ENST00000399581 597 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 RN7SKP188-201ENST00000410789 317 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 RMRPP5-201ENST00000411156 267 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.08□□□□□ -1.44
SUMO3P55854 MTCO2P8-201ENST00000412213 658 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 PTP4A1P7-201ENST00000423476 514 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC115285.1-201ENST00000424879 736 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 E2F6P1-201ENST00000428850 745 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AC015983.1-201ENST00000441577 373 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 E2F6P3-201ENST00000441743 743 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.08□□□□□ -1.44
SUMO3P55854 UBBP5-201ENST00000446970 266 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AC002075.1-201ENST00000457396 676 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 RN7SL350P-201ENST00000492591 299 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.08□□□□□ -1.44
SUMO3P55854 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 AP000916.1-201ENST00000533869 835 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AC009729.1-201ENST00000548873 1133 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC106734.1-201ENST00000568646 663 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC006116.5-201ENST00000591936 559 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 RPL7AP69-201ENST00000595306 806 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 SNX6P1-201ENST00000601728 1224 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AL359704.2-201ENST00000604335 521 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 AC005393.1-201ENST00000617916 584 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SUMO3P55854 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 TATDN2P3-201ENST00000452855 3665 ntBASIC6.08□□□□□ -1.44
SUMO3P55854 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.08□□□□□ -1.44
SUMO3P55854 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SUMO3P55854 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SUMO3P55854 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.07□□□□□ -1.44
SUMO3P55854 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 LCOR-201ENST00000286067 4542 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 AL133243.4-201ENST00000623116 3109 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 OR2M1P-201ENST00000318104 951 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC234772.1-201ENST00000377927 937 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 RNU6-481P-201ENST00000384194 107 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC026310.1-201ENST00000396004 378 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AL359694.1-201ENST00000403247 604 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 RNU4-74P-201ENST00000411280 161 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AL929472.1-201ENST00000417484 429 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms