Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.24□□□□□ -1.41
LIMK2P53671 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.24□□□□□ -1.41
LIMK2P53671 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.24□□□□□ -1.41
LIMK2P53671 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK2P53671 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK2P53671 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK2P53671 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
LIMK2P53671 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LIMK2P53671 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 RN7SKP240-201ENST00000410583 375 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK2P53671 VN1R3-201ENST00000418822 919 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 AC245884.2-201ENST00000426257 404 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 AL354707.3-201ENST00000427308 331 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK2P53671 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 EMC3-AS1-205ENST00000438698 534 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 MORF4-201ENST00000447135 971 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK2P53671 Z83838.1-202ENST00000456225 839 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK2P53671 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK2P53671 OR51A1P-201ENST00000511110 946 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.23□□□□□ -1.41
LIMK2P53671 HMGN1P17-201ENST00000513734 295 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 OR7E158P-201ENST00000524483 910 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.23□□□□□ -1.41
LIMK2P53671 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LIMK2P53671 GLYATL1P2-202ENST00000588046 902 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK2P53671 RN7SL261P-201ENST00000613441 282 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 AC025262.3-201ENST00000623666 360 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 OR7E91P-202ENST00000642062 1198 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 QRSL1P1-201ENST00000400977 1540 ntBASIC6.23□□□□□ -1.41
LIMK2P53671 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK2P53671 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
LIMK2P53671 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LIMK2P53671 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
LIMK2P53671 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK2P53671 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LIMK2P53671 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK2P53671 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK2P53671 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
LIMK2P53671 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK2P53671 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
LIMK2P53671 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
LIMK2P53671 SNX18P3-202ENST00000565670 1750 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LIMK2P53671 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK2P53671 GCNT1P4-201ENST00000404096 329 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 DHFRP2-201ENST00000414224 547 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 MTND2P12-201ENST00000417560 1252 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK2P53671 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK2P53671 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK2P53671 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
LIMK2P53671 RPL7AP14-201ENST00000424041 802 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 AC115283.1-201ENST00000427353 400 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 RPL34P27-201ENST00000428810 349 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 RPSAP65-201ENST00000429660 595 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 KCTD9P1-201ENST00000430462 1167 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 AL390879.1-201ENST00000439143 386 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 BX679664.2-201ENST00000439282 283 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 GTF2IP14-201ENST00000441415 586 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 HMGN1P2-201ENST00000445197 310 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK2P53671 RN7SL369P-201ENST00000477138 299 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.22□□□□□ -1.41
LIMK2P53671 SUMO2P19-201ENST00000518920 295 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK2P53671 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK2P53671 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK2P53671 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK2P53671 SNORA74.4-201ENST00000607595 199 ntBASIC6.22□□□□□ -1.41
LIMK2P53671 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK2P53671 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK2P53671 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms