Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CX3CR1P49238 RPL11P4-201ENST00000332269 436 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CX3CR1P49238 RNU1-49P-201ENST00000363468 159 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 NACAP7-201ENST00000407371 609 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC015977.1-201ENST00000418887 292 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.4□□□□□ -1.54
CX3CR1P49238 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.4□□□□□ -1.54
CX3CR1P49238 GAPDHP19-201ENST00000431768 1005 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AL022324.2-201ENST00000434827 780 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 PPIAP10-201ENST00000438675 458 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 OR2L9P-201ENST00000444456 913 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 GAPDHP23-201ENST00000444823 993 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 RBMY2AP-201ENST00000445405 1157 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.4□□□□□ -1.54
CX3CR1P49238 RBMY2CP-201ENST00000448575 1157 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 RBMY2DP-202ENST00000448881 1157 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 RAB28P2-201ENST00000454299 641 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AC135999.1-201ENST00000478962 479 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC093815.1-201ENST00000508637 280 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 KHDC1P1-201ENST00000511053 508 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 RNU6-1334P-201ENST00000516032 105 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 RNA5SP206-201ENST00000516703 121 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 Y_RNA.710-201ENST00000516975 110 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 OR6M2P-201ENST00000529831 871 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AP001858.2-201ENST00000536213 601 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.4□□□□□ -1.54
CX3CR1P49238 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.4□□□□□ -1.54
CX3CR1P49238 RN7SL66P-201ENST00000582099 264 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.4□□□□□ -1.54
CX3CR1P49238 MIR132-201ENST00000591554 101 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AC004890.3-201ENST00000605566 1095 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.4□□□□□ -1.54
CX3CR1P49238 AL137067.2-201ENST00000621202 131 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CX3CR1P49238 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CX3CR1P49238 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CX3CR1P49238 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CX3CR1P49238 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
CX3CR1P49238 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CX3CR1P49238 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CX3CR1P49238 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CX3CR1P49238 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AL133243.2-201ENST00000610331 1621 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CX3CR1P49238 RNA5SP346-201ENST00000363541 121 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 SNORA64.3-201ENST00000365647 134 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 AL050305.1-201ENST00000399993 1230 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 RNU6-233P-201ENST00000410845 141 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CR1P49238 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.39□□□□□ -1.55
CX3CR1P49238 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC245291.3-201ENST00000443400 292 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 AC092601.1-201ENST00000444526 383 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AL133351.3-201ENST00000454998 193 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CR1P49238 SNX18P24-201ENST00000505249 671 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.39□□□□□ -1.55
CX3CR1P49238 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CR1P49238 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CR1P49238 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms