Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CASC19-246ENST00000641625 1606 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AP003486.1-201ENST00000525716 3994 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.7□□□□□ -1.5
APOBEC1P41238 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
APOBEC1P41238 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
APOBEC1P41238 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 RNU6-670P-201ENST00000364312 104 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AL451142.1-201ENST00000375867 775 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 SNORA70H-201ENST00000383910 135 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 SNORA70J-201ENST00000384182 135 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 RNU6-883P-201ENST00000384597 107 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 RN7SKP146-201ENST00000410242 334 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 GABARAPL3-201ENST00000412799 354 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AC096644.3-201ENST00000416788 338 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.7□□□□□ -1.5
APOBEC1P41238 OSTCP4-201ENST00000424397 449 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.7□□□□□ -1.5
APOBEC1P41238 SOCS5P1-201ENST00000440415 949 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AC073476.1-201ENST00000452854 407 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 RANP2-201ENST00000456833 229 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.7□□□□□ -1.5
APOBEC1P41238 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 RPL37AP8-201ENST00000494116 276 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.7□□□□□ -1.5
APOBEC1P41238 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.7□□□□□ -1.5
APOBEC1P41238 AC010547.7-201ENST00000570323 333 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AC012368.3-201ENST00000604190 219 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.7□□□□□ -1.5
APOBEC1P41238 AL137246.2-201ENST00000613439 662 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.7□□□□□ -1.5
APOBEC1P41238 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 AC116667.2-201ENST00000641075 823 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
APOBEC1P41238 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 SNX18P3-202ENST00000565670 1750 ntBASIC5.7□□□□□ -1.5
APOBEC1P41238 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
APOBEC1P41238 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.7□□□□□ -1.5
APOBEC1P41238 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
APOBEC1P41238 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
APOBEC1P41238 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.69□□□□□ -1.5
APOBEC1P41238 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.69□□□□□ -1.5
APOBEC1P41238 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
APOBEC1P41238 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
APOBEC1P41238 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
APOBEC1P41238 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
APOBEC1P41238 AL137058.3-201ENST00000624531 3099 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 RNA5SP77-201ENST00000365394 120 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.69□□□□□ -1.5
APOBEC1P41238 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
APOBEC1P41238 AL589655.1-201ENST00000405398 482 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
APOBEC1P41238 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.69□□□□□ -1.5
APOBEC1P41238 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.69□□□□□ -1.5
APOBEC1P41238 AC007383.1-201ENST00000445875 636 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.69□□□□□ -1.5
APOBEC1P41238 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.69□□□□□ -1.5
APOBEC1P41238 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.69□□□□□ -1.5
APOBEC1P41238 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.69□□□□□ -1.5
APOBEC1P41238 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.69□□□□□ -1.5
APOBEC1P41238 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.69□□□□□ -1.5
APOBEC1P41238 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.69□□□□□ -1.5
APOBEC1P41238 OR4D12P-201ENST00000509361 911 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 AC117525.1-201ENST00000515228 503 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.69□□□□□ -1.5
APOBEC1P41238 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.69□□□□□ -1.5
APOBEC1P41238 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.69□□□□□ -1.5
APOBEC1P41238 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.69□□□□□ -1.5
APOBEC1P41238 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.69□□□□□ -1.5
APOBEC1P41238 MT1CP-201ENST00000567054 174 ntBASIC5.69□□□□□ -1.5
APOBEC1P41238 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.69□□□□□ -1.5
APOBEC1P41238 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.69□□□□□ -1.5
APOBEC1P41238 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.69□□□□□ -1.5
APOBEC1P41238 DYNLL1P1-201ENST00000595442 269 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms