Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.51□□□□□ -1.37
CHRNA3P32297 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA3P32297 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
CHRNA3P32297 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA3P32297 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHRNA3P32297 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 CASC19-246ENST00000641625 1606 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA3P32297 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CHRNA3P32297 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CHRNA3P32297 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA3P32297 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC022164.1-201ENST00000568767 2673 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA3P32297 RNA5SP279-201ENST00000365513 117 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.5□□□□□ -1.37
CHRNA3P32297 DHFRP2-201ENST00000414224 547 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AL354707.3-201ENST00000427308 331 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 GAPDHP59-201ENST00000435908 267 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 RPSAP41-201ENST00000439695 860 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC117394.1-201ENST00000477323 567 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 KATNBL1P4-201ENST00000503545 918 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC018797.1-201ENST00000510791 255 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 RNA5SP441-201ENST00000516809 88 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 AL078601.3-201ENST00000573303 535 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA3P32297 AP001267.4-201ENST00000602598 545 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 uc_338.31-201ENST00000615595 186 ntBASIC6.5□□□□□ -1.37
CHRNA3P32297 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA3P32297 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA3P32297 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.5□□□□□ -1.37
CHRNA3P32297 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.5□□□□□ -1.37
CHRNA3P32297 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHRNA3P32297 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA3P32297 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA3P32297 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA3P32297 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA3P32297 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA3P32297 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA3P32297 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.49□□□□□ -1.37
CHRNA3P32297 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA3P32297 MIR188-201ENST00000385034 86 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 CXADRP1-201ENST00000398098 1095 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 RBBP4P5-201ENST00000398583 1266 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 AL121977.1-201ENST00000401636 979 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 VN1R12P-201ENST00000403778 876 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.49□□□□□ -1.37
CHRNA3P32297 MTND2P12-201ENST00000417560 1252 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 AL365220.1-201ENST00000432923 399 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.49□□□□□ -1.37
CHRNA3P32297 EMC3-AS1-205ENST00000438698 534 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 RBMY2AP-201ENST00000445405 1157 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 RBMY2CP-201ENST00000448575 1157 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 RBMY2DP-202ENST00000448881 1157 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 RANP2-201ENST00000456833 229 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 AC021006.1-201ENST00000489849 553 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AC093524.1-201ENST00000564266 1094 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 MIR4271-201ENST00000582451 67 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 RN7SL475P-201ENST00000583379 298 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.49□□□□□ -1.37
CHRNA3P32297 AL135999.3-201ENST00000610501 812 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.49□□□□□ -1.37
CHRNA3P32297 CXADRP3-202ENST00000617265 1100 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms