Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.16□□□□□ -1.42
CD40P25942 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 HPRT1P2-201ENST00000505250 544 ntBASIC6.16□□□□□ -1.42
CD40P25942 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 MRPS33P3-201ENST00000513456 322 ntBASIC6.16□□□□□ -1.42
CD40P25942 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 DCAF13P2-201ENST00000514188 555 ntBASIC6.16□□□□□ -1.42
CD40P25942 AC120036.3-201ENST00000517826 292 ntBASIC6.16□□□□□ -1.42
CD40P25942 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 GCSHP4-201ENST00000538792 439 ntBASIC6.16□□□□□ -1.42
CD40P25942 DUX4L52-201ENST00000549363 777 ntBASIC6.16□□□□□ -1.42
CD40P25942 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 AL354943.1-201ENST00000572103 781 ntBASIC6.16□□□□□ -1.42
CD40P25942 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 AP001269.3-201ENST00000588718 329 ntBASIC6.16□□□□□ -1.42
CD40P25942 VN1R83P-201ENST00000595685 445 ntBASIC6.16□□□□□ -1.42
CD40P25942 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 AC005277.2-201ENST00000617898 390 ntBASIC6.16□□□□□ -1.42
CD40P25942 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 RPSAP68-201ENST00000625020 438 ntBASIC6.16□□□□□ -1.42
CD40P25942 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 MIR1322-201ENST00000638013 71 ntBASIC6.16□□□□□ -1.42
CD40P25942 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 AL512353.3-201ENST00000417517 1326 ntBASIC6.16□□□□□ -1.42
CD40P25942 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CD40P25942 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.15□□□□□ -1.42
CD40P25942 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.15□□□□□ -1.42
CD40P25942 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.15□□□□□ -1.42
CD40P25942 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 YES1P1-201ENST00000418510 1628 ntBASIC6.15□□□□□ -1.42
CD40P25942 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.15□□□□□ -1.42
CD40P25942 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.15□□□□□ -1.42
CD40P25942 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 RNU1-87P-201ENST00000363727 170 ntBASIC6.15□□□□□ -1.42
CD40P25942 RNU4-7P-201ENST00000364758 141 ntBASIC6.15□□□□□ -1.42
CD40P25942 RNU6-452P-201ENST00000384406 107 ntBASIC6.15□□□□□ -1.42
CD40P25942 RNU6-83P-201ENST00000384568 112 ntBASIC6.15□□□□□ -1.42
CD40P25942 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.15□□□□□ -1.42
CD40P25942 MORF4L1P6-201ENST00000418771 268 ntBASIC6.15□□□□□ -1.42
CD40P25942 AC097721.1-201ENST00000427150 1253 ntBASIC6.15□□□□□ -1.42
CD40P25942 AL365396.1-201ENST00000430854 671 ntBASIC6.15□□□□□ -1.42
CD40P25942 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.15□□□□□ -1.42
CD40P25942 AC009518.3-201ENST00000438972 253 ntBASIC6.15□□□□□ -1.42
CD40P25942 FGF7P5-201ENST00000441829 291 ntBASIC6.15□□□□□ -1.42
CD40P25942 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.15□□□□□ -1.42
CD40P25942 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.15□□□□□ -1.42
CD40P25942 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.15□□□□□ -1.42
CD40P25942 AC022730.1-201ENST00000473114 568 ntBASIC6.15□□□□□ -1.42
CD40P25942 RN7SL868P-201ENST00000485915 303 ntBASIC6.15□□□□□ -1.42
CD40P25942 AC096661.1-201ENST00000515870 822 ntBASIC6.15□□□□□ -1.42
CD40P25942 RNU5A-4P-201ENST00000516588 111 ntBASIC6.15□□□□□ -1.42
CD40P25942 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.15□□□□□ -1.42
CD40P25942 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.15□□□□□ -1.42
CD40P25942 MTCO3P15-201ENST00000526563 574 ntBASIC6.15□□□□□ -1.42
CD40P25942 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.15□□□□□ -1.42
CD40P25942 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.15□□□□□ -1.42
CD40P25942 AL135978.1-201ENST00000553618 1266 ntBASIC6.15□□□□□ -1.42
CD40P25942 OR11H3P-201ENST00000554547 982 ntBASIC6.15□□□□□ -1.42
CD40P25942 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.15□□□□□ -1.42
CD40P25942 SETP1-201ENST00000556014 845 ntBASIC6.15□□□□□ -1.42
CD40P25942 AL109628.1-201ENST00000556877 366 ntBASIC6.15□□□□□ -1.42
CD40P25942 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CD40P25942 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CD40P25942 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms