Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CHGAP10645 EEF1A1P28-201ENST00000450915 1403 ntBASIC10.86□□□□□ -0.67
CHGAP10645 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 RNA5SP27-201ENST00000363839 119 ntBASIC10.86□□□□□ -0.67
CHGAP10645 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CHGAP10645 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC10.86□□□□□ -0.67
CHGAP10645 RN7SKP261-201ENST00000410948 278 ntBASIC10.86□□□□□ -0.67
CHGAP10645 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 HMGB3P31-201ENST00000413333 595 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC10.86□□□□□ -0.67
CHGAP10645 SMARCE1P1-201ENST00000417747 1186 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AC004448.2-201ENST00000422360 586 ntBASIC10.86□□□□□ -0.67
CHGAP10645 ANXA2P2-201ENST00000435128 1020 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC10.86□□□□□ -0.67
CHGAP10645 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC10.86□□□□□ -0.67
CHGAP10645 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC10.86□□□□□ -0.67
CHGAP10645 RNA5SP269-201ENST00000459032 137 ntBASIC10.86□□□□□ -0.67
CHGAP10645 RN7SL706P-201ENST00000460079 292 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AC015820.1-201ENST00000473882 321 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AC079594.1-201ENST00000489757 331 ntBASIC10.86□□□□□ -0.67
CHGAP10645 HSPE1P23-201ENST00000509838 286 ntBASIC10.86□□□□□ -0.67
CHGAP10645 RNU6-506P-201ENST00000516553 94 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC10.86□□□□□ -0.67
CHGAP10645 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC10.86□□□□□ -0.67
CHGAP10645 DPPA2P4-201ENST00000563717 878 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AC091932.1-201ENST00000569381 427 ntBASIC10.86□□□□□ -0.67
CHGAP10645 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC10.86□□□□□ -0.67
CHGAP10645 AC009220.3-201ENST00000604318 586 ntBASIC10.86□□□□□ -0.67
CHGAP10645 AC092954.2-201ENST00000609103 430 ntBASIC10.86□□□□□ -0.67
CHGAP10645 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 AC015722.2-201ENST00000622210 551 ntBASIC10.86□□□□□ -0.67
CHGAP10645 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CHGAP10645 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC10.86□□□□□ -0.67
CHGAP10645 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC10.86□□□□□ -0.67
CHGAP10645 AL136298.2-201ENST00000556497 1570 ntBASIC10.86□□□□□ -0.67
CHGAP10645 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHGAP10645 MARK2P4-201ENST00000503381 2380 ntBASIC10.85□□□□□ -0.67
CHGAP10645 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC10.85□□□□□ -0.67
CHGAP10645 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 AC006058.1-201ENST00000568686 5067 ntBASIC10.85□□□□□ -0.67
CHGAP10645 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
CHGAP10645 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC10.85□□□□□ -0.67
CHGAP10645 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
CHGAP10645 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CHGAP10645 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 RN7SKP36-201ENST00000363997 312 ntBASIC10.85□□□□□ -0.67
CHGAP10645 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CHGAP10645 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CHGAP10645 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC10.85□□□□□ -0.67
CHGAP10645 CDY14P-201ENST00000431260 1014 ntBASIC10.85□□□□□ -0.67
CHGAP10645 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC10.85□□□□□ -0.67
CHGAP10645 NPM1P51-201ENST00000443470 744 ntBASIC10.85□□□□□ -0.67
CHGAP10645 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC10.85□□□□□ -0.67
CHGAP10645 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CHGAP10645 HMGB1P5-202ENST00000451497 985 ntBASIC10.85□□□□□ -0.67
CHGAP10645 CDY23P-201ENST00000451661 1014 ntBASIC10.85□□□□□ -0.67
CHGAP10645 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 ST13P21-201ENST00000453250 1098 ntBASIC10.85□□□□□ -0.67
CHGAP10645 CDC42P1-201ENST00000456658 548 ntBASIC10.85□□□□□ -0.67
CHGAP10645 RPL23AP80-201ENST00000495605 424 ntBASIC10.85□□□□□ -0.67
CHGAP10645 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC10.85□□□□□ -0.67
CHGAP10645 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CHGAP10645 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC10.85□□□□□ -0.67
CHGAP10645 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC10.85□□□□□ -0.67
CHGAP10645 OR7E161P-201ENST00000533722 967 ntBASIC10.85□□□□□ -0.67
CHGAP10645 AC126177.6-201ENST00000550420 1009 ntBASIC10.85□□□□□ -0.67
CHGAP10645 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC10.85□□□□□ -0.67
CHGAP10645 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC10.85□□□□□ -0.67
CHGAP10645 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC10.85□□□□□ -0.67
CHGAP10645 AC006967.3-201ENST00000594086 1093 ntBASIC10.85□□□□□ -0.67
CHGAP10645 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC10.85□□□□□ -0.67
CHGAP10645 AC012360.2-201ENST00000609349 391 ntBASIC10.85□□□□□ -0.67
CHGAP10645 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC10.85□□□□□ -0.67
CHGAP10645 AP003789.1-201ENST00000617737 605 ntBASIC10.85□□□□□ -0.67
CHGAP10645 MTND1P37-201ENST00000636562 264 ntBASIC10.85□□□□□ -0.67
CHGAP10645 JAML-213ENST00000640745 951 ntTSL 5 BASIC10.85□□□□□ -0.67
CHGAP10645 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC10.85□□□□□ -0.67
CHGAP10645 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHGAP10645 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms