Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC114546.4-201ENST00000624413 369 ntBASIC7.85□□□□□ -1.15
HMGB1P09429 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.85□□□□□ -1.15
HMGB1P09429 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
HMGB1P09429 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.85□□□□□ -1.15
HMGB1P09429 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
HMGB1P09429 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.85□□□□□ -1.15
HMGB1P09429 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HMGB1P09429 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HMGB1P09429 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.85□□□□□ -1.15
HMGB1P09429 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HMGB1P09429 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.85□□□□□ -1.15
HMGB1P09429 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HMGB1P09429 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HMGB1P09429 IMMTP1-201ENST00000435590 2219 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.84□□□□□ -1.15
HMGB1P09429 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.84□□□□□ -1.15
HMGB1P09429 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.84□□□□□ -1.15
HMGB1P09429 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.84□□□□□ -1.15
HMGB1P09429 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.84□□□□□ -1.15
HMGB1P09429 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 MIR138-2-201ENST00000384916 84 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AL590635.1-201ENST00000406314 586 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.84□□□□□ -1.15
HMGB1P09429 AL359092.1-201ENST00000417156 265 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AL929472.1-201ENST00000417484 429 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.84□□□□□ -1.15
HMGB1P09429 CYCSP52-201ENST00000422857 310 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 TVP23CP1-201ENST00000450317 639 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AC009244.1-201ENST00000450566 258 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AC020779.1-201ENST00000478757 796 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 SUMO1P1-201ENST00000497904 306 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.84□□□□□ -1.15
HMGB1P09429 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC010287.1-201ENST00000566916 357 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.84□□□□□ -1.15
HMGB1P09429 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC012557.1-201ENST00000607115 611 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HMGB1P09429 AC018692.2-201ENST00000624130 348 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
HMGB1P09429 AC022905.1-201ENST00000503430 3048 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AL359715.4-201ENST00000606629 1436 ntBASIC7.84□□□□□ -1.15
HMGB1P09429 AC010624.4-201ENST00000597606 1351 ntBASIC7.84□□□□□ -1.16
HMGB1P09429 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
HMGB1P09429 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.83□□□□□ -1.16
HMGB1P09429 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 PSMC1P6-201ENST00000477233 1319 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
HMGB1P09429 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 RNU6-666P-201ENST00000363499 107 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 ZNF37CP-201ENST00000406795 241 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
HMGB1P09429 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 AL672212.1-201ENST00000422246 400 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AC006455.6-201ENST00000426192 893 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 UBBP5-201ENST00000446970 266 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.83□□□□□ -1.16
HMGB1P09429 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.83□□□□□ -1.16
HMGB1P09429 TREML3P-201ENST00000457327 501 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 RN7SL372P-201ENST00000461982 298 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AC131392.1-201ENST00000506490 633 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC138866.2-201ENST00000508650 584 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 GUSBP9-201ENST00000510138 584 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.83□□□□□ -1.16
HMGB1P09429 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.83□□□□□ -1.16
HMGB1P09429 AC125612.1-201ENST00000547580 377 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 NOP56P3-201ENST00000549457 385 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AC023080.1-201ENST00000551663 931 ntBASIC7.83□□□□□ -1.16
HMGB1P09429 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms