Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RETP07949 MIR143-201ENST00000385300 106 ntBASIC6.4□□□□□ -1.38
RETP07949 MIR1178-201ENST00000408396 91 ntBASIC6.4□□□□□ -1.38
RETP07949 EEF1B2P8-201ENST00000414101 671 ntBASIC6.4□□□□□ -1.38
RETP07949 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.4□□□□□ -1.38
RETP07949 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.4□□□□□ -1.38
RETP07949 AC245452.2-201ENST00000435222 392 ntBASIC6.4□□□□□ -1.38
RETP07949 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.4□□□□□ -1.38
RETP07949 HMGN1P36-201ENST00000446623 298 ntBASIC6.4□□□□□ -1.38
RETP07949 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.4□□□□□ -1.38
RETP07949 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
RETP07949 RPL17P2-201ENST00000491913 451 ntBASIC6.4□□□□□ -1.38
RETP07949 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.4□□□□□ -1.38
RETP07949 RNA5SP340-201ENST00000517132 107 ntBASIC6.4□□□□□ -1.38
RETP07949 TMEM97P2-201ENST00000517841 403 ntBASIC6.4□□□□□ -1.38
RETP07949 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.4□□□□□ -1.38
RETP07949 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.4□□□□□ -1.38
RETP07949 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RETP07949 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.4□□□□□ -1.38
RETP07949 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.4□□□□□ -1.38
RETP07949 AC011497.2-201ENST00000600255 639 ntBASIC6.4□□□□□ -1.38
RETP07949 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.4□□□□□ -1.38
RETP07949 AL583832.1-201ENST00000603227 784 ntBASIC6.4□□□□□ -1.38
RETP07949 AC009237.12-201ENST00000604755 742 ntBASIC6.4□□□□□ -1.38
RETP07949 AC245014.3-201ENST00000618589 347 ntBASIC6.4□□□□□ -1.38
RETP07949 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.4□□□□□ -1.38
RETP07949 AP000550.3-201ENST00000637734 379 ntBASIC6.4□□□□□ -1.38
RETP07949 AC009779.8-201ENST00000641684 4384 ntBASIC6.4□□□□□ -1.38
RETP07949 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RETP07949 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.4□□□□□ -1.39
RETP07949 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RETP07949 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RETP07949 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RETP07949 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
RETP07949 AL117378.2-201ENST00000622916 1337 ntBASIC6.4□□□□□ -1.39
RETP07949 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.4□□□□□ -1.39
RETP07949 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RETP07949 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
RETP07949 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.4□□□□□ -1.39
RETP07949 DOCK11P1-201ENST00000553480 5932 ntBASIC6.4□□□□□ -1.39
RETP07949 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.39□□□□□ -1.39
RETP07949 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.39□□□□□ -1.39
RETP07949 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RETP07949 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
RETP07949 AC027279.1-201ENST00000568885 4284 ntBASIC6.39□□□□□ -1.39
RETP07949 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RETP07949 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.39□□□□□ -1.39
RETP07949 RNA5SP477-201ENST00000362639 119 ntBASIC6.39□□□□□ -1.39
RETP07949 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.39□□□□□ -1.39
RETP07949 SETP9-201ENST00000423837 832 ntBASIC6.39□□□□□ -1.39
RETP07949 CFL1P4-201ENST00000451536 498 ntBASIC6.39□□□□□ -1.39
RETP07949 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.39□□□□□ -1.39
RETP07949 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.39□□□□□ -1.39
RETP07949 AC011476.1-201ENST00000466725 307 ntBASIC6.39□□□□□ -1.39
RETP07949 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.39□□□□□ -1.39
RETP07949 AL158068.1-201ENST00000506116 616 ntBASIC6.39□□□□□ -1.39
RETP07949 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.39□□□□□ -1.39
RETP07949 SNORA26.10-201ENST00000516427 141 ntBASIC6.39□□□□□ -1.39
RETP07949 RN7SKP238-201ENST00000516483 249 ntBASIC6.39□□□□□ -1.39
RETP07949 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.39□□□□□ -1.39
RETP07949 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.39□□□□□ -1.39
RETP07949 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.39□□□□□ -1.39
RETP07949 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.39□□□□□ -1.39
RETP07949 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.39□□□□□ -1.39
RETP07949 AC135626.1-201ENST00000556983 435 ntBASIC6.39□□□□□ -1.39
RETP07949 AC023389.2-201ENST00000580031 955 ntBASIC6.39□□□□□ -1.39
RETP07949 AC074141.1-201ENST00000588129 2995 ntBASIC6.39□□□□□ -1.39
RETP07949 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.39□□□□□ -1.39
RETP07949 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.39□□□□□ -1.39
RETP07949 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.39□□□□□ -1.39
RETP07949 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.39□□□□□ -1.39
RETP07949 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.39□□□□□ -1.39
RETP07949 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.39□□□□□ -1.39
RETP07949 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RETP07949 AC034229.2-201ENST00000566945 2508 ntBASIC6.39□□□□□ -1.39
RETP07949 AC018717.1-201ENST00000457712 1505 ntBASIC6.39□□□□□ -1.39
RETP07949 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 AL355377.1-201ENST00000621125 1653 ntBASIC6.39□□□□□ -1.39
RETP07949 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RETP07949 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RETP07949 RACGAP1P-201ENST00000550663 1879 ntBASIC6.39□□□□□ -1.39
RETP07949 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 AC139426.3-201ENST00000605648 2059 ntBASIC6.38□□□□□ -1.39
RETP07949 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RETP07949 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RETP07949 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 RN7SKP292-201ENST00000365522 317 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms