Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.65□□□□□ -1.51
P04436 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.65□□□□□ -1.51
P04436 AP000866.6-201ENST00000638898 3579 ntBASIC5.65□□□□□ -1.51
P04436 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
P04436 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
P04436 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.64□□□□□ -1.51
P04436 QRSL1P1-201ENST00000400977 1540 ntBASIC5.64□□□□□ -1.51
P04436 MTCO1P28-201ENST00000574177 1528 ntBASIC5.64□□□□□ -1.51
P04436 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 RNU6-673P-201ENST00000365084 104 ntBASIC5.64□□□□□ -1.51
P04436 RPL12P12-201ENST00000424633 501 ntBASIC5.64□□□□□ -1.51
P04436 SERPINA7P1-201ENST00000443077 631 ntBASIC5.64□□□□□ -1.51
P04436 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.64□□□□□ -1.51
P04436 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.64□□□□□ -1.51
P04436 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.64□□□□□ -1.51
P04436 AC023818.1-201ENST00000498379 384 ntBASIC5.64□□□□□ -1.51
P04436 LSM3P4-201ENST00000502948 309 ntBASIC5.64□□□□□ -1.51
P04436 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.64□□□□□ -1.51
P04436 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 AC253576.1-201ENST00000511645 1156 ntBASIC5.64□□□□□ -1.51
P04436 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.64□□□□□ -1.51
P04436 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.64□□□□□ -1.51
P04436 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.64□□□□□ -1.51
P04436 CYCSP38-201ENST00000559840 322 ntBASIC5.64□□□□□ -1.51
P04436 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.64□□□□□ -1.51
P04436 AC093524.1-201ENST00000564266 1094 ntBASIC5.64□□□□□ -1.51
P04436 AC007066.2-202ENST00000566531 914 ntBASIC5.64□□□□□ -1.51
P04436 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.64□□□□□ -1.51
P04436 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.64□□□□□ -1.51
P04436 AC027229.1-201ENST00000583887 253 ntBASIC5.64□□□□□ -1.51
P04436 AC008555.7-201ENST00000605008 583 ntBASIC5.64□□□□□ -1.51
P04436 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.64□□□□□ -1.51
P04436 AC245014.3-201ENST00000618589 347 ntBASIC5.64□□□□□ -1.51
P04436 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.64□□□□□ -1.51
P04436 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.64□□□□□ -1.51
P04436 AC011416.1-201ENST00000514947 1732 ntBASIC5.64□□□□□ -1.51
P04436 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
P04436 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
P04436 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.64□□□□□ -1.51
P04436 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.64□□□□□ -1.51
P04436 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.64□□□□□ -1.51
P04436 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
P04436 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
P04436 Z93929.1-201ENST00000418200 1475 ntBASIC5.64□□□□□ -1.51
P04436 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.64□□□□□ -1.51
P04436 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
P04436 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
P04436 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.64□□□□□ -1.51
P04436 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
P04436 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.63□□□□□ -1.51
P04436 CASC19-238ENST00000641523 1558 ntBASIC5.63□□□□□ -1.51
P04436 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.63□□□□□ -1.51
P04436 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
P04436 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 AL359091.1-201ENST00000449048 1734 ntBASIC5.63□□□□□ -1.51
P04436 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
P04436 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.63□□□□□ -1.51
P04436 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.63□□□□□ -1.51
P04436 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
P04436 AC023141.3-201ENST00000436698 278 ntBASIC5.63□□□□□ -1.51
P04436 EIF5AP4-201ENST00000441206 465 ntBASIC5.63□□□□□ -1.51
P04436 HMGN1P2-201ENST00000445197 310 ntBASIC5.63□□□□□ -1.51
P04436 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
P04436 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.63□□□□□ -1.51
P04436 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.63□□□□□ -1.51
P04436 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.63□□□□□ -1.51
P04436 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.63□□□□□ -1.51
P04436 NPIPB1P-202ENST00000588786 828 ntBASIC5.63□□□□□ -1.51
P04436 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms