Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
APOEP02649 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
APOEP02649 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
APOEP02649 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.48□□□□□ -1.37
APOEP02649 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.48□□□□□ -1.37
APOEP02649 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
APOEP02649 AC005225.5-201ENST00000623547 2225 ntBASIC6.48□□□□□ -1.37
APOEP02649 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.48□□□□□ -1.37
APOEP02649 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.48□□□□□ -1.37
APOEP02649 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.48□□□□□ -1.37
APOEP02649 RNU11-6P-201ENST00000391127 133 ntBASIC6.48□□□□□ -1.37
APOEP02649 HMGA1P8-201ENST00000414130 321 ntBASIC6.48□□□□□ -1.37
APOEP02649 AL035422.1-201ENST00000414193 397 ntBASIC6.48□□□□□ -1.37
APOEP02649 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.48□□□□□ -1.37
APOEP02649 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 PSMD10P2-201ENST00000432890 672 ntBASIC6.48□□□□□ -1.37
APOEP02649 AC016908.1-201ENST00000442571 1219 ntBASIC6.48□□□□□ -1.37
APOEP02649 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.48□□□□□ -1.37
APOEP02649 AC010240.2-201ENST00000445363 1205 ntBASIC6.48□□□□□ -1.37
APOEP02649 AC103563.5-201ENST00000455643 364 ntBASIC6.48□□□□□ -1.37
APOEP02649 AC091874.2-201ENST00000505889 720 ntBASIC6.48□□□□□ -1.37
APOEP02649 AP001804.1-201ENST00000526868 919 ntBASIC6.48□□□□□ -1.37
APOEP02649 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.48□□□□□ -1.37
APOEP02649 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.48□□□□□ -1.37
APOEP02649 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.48□□□□□ -1.37
APOEP02649 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.48□□□□□ -1.37
APOEP02649 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.48□□□□□ -1.37
APOEP02649 OR1E3-201ENST00000575608 948 ntBASIC6.48□□□□□ -1.37
APOEP02649 AP005136.2-201ENST00000583253 1049 ntBASIC6.48□□□□□ -1.37
APOEP02649 AP001823.1-201ENST00000604056 1003 ntBASIC6.48□□□□□ -1.37
APOEP02649 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
APOEP02649 AC073592.6-201ENST00000624271 415 ntBASIC6.48□□□□□ -1.37
APOEP02649 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.48□□□□□ -1.37
APOEP02649 AC022726.2-201ENST00000634673 547 ntBASIC6.48□□□□□ -1.37
APOEP02649 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.48□□□□□ -1.37
APOEP02649 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
APOEP02649 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
APOEP02649 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.47□□□□□ -1.37
APOEP02649 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
APOEP02649 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.47□□□□□ -1.37
APOEP02649 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.47□□□□□ -1.37
APOEP02649 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.47□□□□□ -1.37
APOEP02649 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.47□□□□□ -1.37
APOEP02649 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
APOEP02649 AC107977.1-201ENST00000355745 939 ntBASIC6.47□□□□□ -1.37
APOEP02649 RNU1-49P-201ENST00000363468 159 ntBASIC6.47□□□□□ -1.37
APOEP02649 RPS7P8-201ENST00000418311 581 ntBASIC6.47□□□□□ -1.37
APOEP02649 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 H3F3BP1-201ENST00000440551 403 ntBASIC6.47□□□□□ -1.37
APOEP02649 RPL5P7-201ENST00000444235 813 ntBASIC6.47□□□□□ -1.37
APOEP02649 CTSLP6-201ENST00000458273 1002 ntBASIC6.47□□□□□ -1.37
APOEP02649 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.47□□□□□ -1.37
APOEP02649 AC090958.1-201ENST00000511122 351 ntBASIC6.47□□□□□ -1.37
APOEP02649 Y_RNA.710-201ENST00000516975 110 ntBASIC6.47□□□□□ -1.37
APOEP02649 AP001858.2-201ENST00000536213 601 ntBASIC6.47□□□□□ -1.37
APOEP02649 AC107958.1-201ENST00000556576 290 ntBASIC6.47□□□□□ -1.37
APOEP02649 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.47□□□□□ -1.37
APOEP02649 OR4H6P-201ENST00000563771 921 ntBASIC6.47□□□□□ -1.37
APOEP02649 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.47□□□□□ -1.37
APOEP02649 AC097641.3-201ENST00000613523 464 ntBASIC6.47□□□□□ -1.37
APOEP02649 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.47□□□□□ -1.37
APOEP02649 AC073488.6-201ENST00000632293 754 ntBASIC6.47□□□□□ -1.37
APOEP02649 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
APOEP02649 AC079753.1-201ENST00000623243 3868 ntBASIC6.47□□□□□ -1.37
APOEP02649 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
APOEP02649 AL133243.2-201ENST00000610331 1621 ntBASIC6.47□□□□□ -1.37
APOEP02649 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
APOEP02649 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.37
APOEP02649 AC024651.2-201ENST00000562480 2098 ntBASIC6.46□□□□□ -1.37
APOEP02649 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.46□□□□□ -1.37
APOEP02649 SHQ1P1-201ENST00000437111 1544 ntBASIC6.46□□□□□ -1.37
APOEP02649 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
APOEP02649 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
APOEP02649 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.46□□□□□ -1.38
APOEP02649 GCNT1P4-201ENST00000404096 329 ntBASIC6.46□□□□□ -1.38
APOEP02649 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 RPL24P2-201ENST00000421023 475 ntBASIC6.46□□□□□ -1.38
APOEP02649 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.46□□□□□ -1.38
APOEP02649 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
APOEP02649 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.46□□□□□ -1.38
APOEP02649 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 DNAJC19P5-201ENST00000443295 316 ntBASIC6.46□□□□□ -1.38
APOEP02649 AL590004.3-202ENST00000445883 451 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms